G29157 (LOC106581475)


Basic Information

Item Value
gene id G29157
gene name LOC106581475
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 58448369 ~ 58448640 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39141
ccagaggtagcctgactgccattaggtaccgagatgagatcctcagaccccttgtaagaccatatgctggtgtggttggccctgggttcctcctaatgcaggacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagatgaaggcattgaagctatggactagcccgcccgttccccagacctgaatccgattgagcacatctgggacatcatgtctcgctccatccaccaacgtcacgttgcaccacagactgtccag

Function

NR:

description
olfactory receptor family C subfamily 2 member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39141 True 272 lncRNA 0.34 1 58448369 58448640

Neighbor

gene id symbol gene type direction distance location
gmds gmds,LOC107711642,LOC107721371 coding upstream 62849 58321035 ~ 58385520 (+)
LOC103034955 LOC108257896,LOC106584199 coding upstream 130890 58282590 ~ 58317479 (+)
LOC103036000 NA coding upstream 186928 58247781 ~ 58261441 (+)
LOC103039449 itpk1,LOC108257830 coding upstream 312916 58086509 ~ 58135453 (+)
LOC103038833 NA coding upstream 367660 58078488 ~ 58080709 (+)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386 coding downstream 9314 58457954 ~ 58480787 (+)
LOC103031977 NA coding downstream 56162 58504802 ~ 58508475 (+)
LOC103021664 LOC108411900,LOC108257513,LOC107684818,LOC107746282,LOC107723542 coding downstream 355607 58804247 ~ 58819777 (+)
LOC103021996 NA coding downstream 416960 58865600 ~ 58882191 (+)
LOC103037011 NA coding downstream 448697 58897337 ~ 58908006 (+)
G29156 NA non-coding upstream 1008 58446904 ~ 58447361 (+)
G29152 NA non-coding upstream 43718 58404353 ~ 58404651 (+)
G29150 NA non-coding upstream 50294 58397668 ~ 58398075 (+)
G29071 NA non-coding upstream 184788 58263198 ~ 58263581 (+)
G29033 NA non-coding upstream 303552 58142873 ~ 58144817 (+)
G29191 NA non-coding downstream 69036 58517676 ~ 58517898 (+)
G29192 NA non-coding downstream 71239 58519879 ~ 58520080 (+)
G29193 NA non-coding downstream 71524 58520164 ~ 58520495 (+)
LOC111191935 NA non-coding downstream 272932 58721572 ~ 58722930 (+)
G29241 NA non-coding downstream 275988 58724628 ~ 58724925 (+)
G29155 foxq1 other upstream 29552 58417394 ~ 58418817 (+)
LOC103042006 NA other upstream 635881 57802891 ~ 57812488 (+)
G28865 NA other upstream 1045977 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 1742277 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 1994435 56337156 ~ 56453934 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 615833 59064473 ~ 59112315 (+)
G29382 NA other downstream 771892 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 772626 59221266 ~ 59228840 (+)
atraid atraid other downstream 1105645 59554285 ~ 59559762 (+)
nme6 nme6 other downstream 1138069 59586709 ~ 59598332 (+)

Expression


Co-expression Network