G29276


Basic Information

Item Value
gene id G29276
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 58860500 ~ 58860827 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39275
gtgtatttgcactttttgtattgctggcatcagataccctcattatatgcacatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctaatggaaatctgtacctactactgtctgaaaatttaatttaagactttgaaacctcctttcacaaaaactttaatactttagaaataaaagtagtcaaaataaatgaatgctcaatattatttgcatatagcaaaataataacatgacatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39275 True 328 lncRNA 0.51 1 58860500 58860827

Neighbor

gene id symbol gene type direction distance location
LOC103021664 LOC108411900,LOC108257513,LOC107684818,LOC107746282,LOC107723542 coding upstream 40723 58804247 ~ 58819777 (+)
LOC103031977 NA coding upstream 352025 58504802 ~ 58508475 (+)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386 coding upstream 379713 58457954 ~ 58480787 (+)
gmds gmds,LOC107711642,LOC107721371 coding upstream 474980 58321035 ~ 58385520 (+)
LOC103034955 LOC108257896,LOC106584199 coding upstream 543021 58282590 ~ 58317479 (+)
LOC103021996 NA coding downstream 4773 58865600 ~ 58882191 (+)
LOC103037011 NA coding downstream 36510 58897337 ~ 58908006 (+)
LOC103022293 eif5,if5,LOC103022293,LOC108435020,LOC107723356,LOC106610956 coding downstream 64549 58925376 ~ 58934791 (+)
LOC103022804 LOC108435018 coding downstream 93274 58954101 ~ 58963663 (+)
LOC103024478 tdh,LOC103024478,LOC108435012,LOC107723287,LOC107561940,LOC107589050,LOC107701506,LOC107746115 coding downstream 254612 59115439 ~ 59123577 (+)
G29267 NA non-coding upstream 10070 58849977 ~ 58850430 (+)
G29263 NA non-coding upstream 34764 58824249 ~ 58825736 (+)
G29251 NA non-coding upstream 80548 58779114 ~ 58779952 (+)
G29241 NA non-coding upstream 135575 58724628 ~ 58724925 (+)
LOC111191935 NA non-coding upstream 137570 58721572 ~ 58722930 (+)
G29290 NA non-coding downstream 27291 58888118 ~ 58888349 (+)
LOC111191936 NA non-coding downstream 27896 58888723 ~ 58895340 (+)
G29299 enpp5 non-coding downstream 74184 58935011 ~ 58948580 (+)
G29304 ccm2,LOC107684794 non-coding downstream 115835 58976662 ~ 58979697 (+)
G29383 NA non-coding downstream 358749 59219576 ~ 59219829 (+)
G29155 foxq1 other upstream 441683 58417394 ~ 58418817 (+)
LOC103042006 NA other upstream 1048012 57802891 ~ 57812488 (+)
G28865 NA other upstream 1458108 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 2154408 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 2406566 56337156 ~ 56453934 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 203646 59064473 ~ 59112315 (+)
G29382 NA other downstream 359705 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 360439 59221266 ~ 59228840 (+)
atraid atraid other downstream 693458 59554285 ~ 59559762 (+)
nme6 nme6 other downstream 725882 59586709 ~ 59598332 (+)

Expression


Co-expression Network