G29369


Basic Information

Item Value
gene id G29369
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59131541 ~ 59132137 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39393
atacccctcgctgcagaaccacaagtccagggggtggggctggatctgatccaactcttcctacgtcgtgttttcattggtctgaAGCAGATCGGACTCTTCCCCATCCGGTTTTACTCACTCGCCTTTCGGAGTCAAGTAAACAATCACGAACGgggaagaggagaaagaaaaaatataaataacaatctGGCAGTAACAACATCCTCATTCTATACTCTCAGTGTACTGGGCATTTTTCCAAGCTCTTTGGAAAATTATACATCGTTACACTCTTTTTATAGAACTCTGTTTTTTGTTCGCCATTTTGATTGtgtattaatatctgtaataataaatgaacatggtagctggtagataagacactcattggcatcctttattttaattatttattttttattttgtctttaggccctttttattaaagataaaaaatgaaatagttaatatttatataggaaatgtacagcattttattatgtttgtaatcacagacatgttccttcttttaaatctgtattgtgtgatttaaatgtgctacgtagcaaataacattttccaggatttATTTGATAAGATAAAAGTCCTGGTCGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39393 True 597 lncRNA 0.45 1 59131541 59132137

Neighbor

gene id symbol gene type direction distance location
ccm2 ccm2 coding downstream 134779 58976662 ~ 58996762 (-)
LOC111189957 enpp5,LOC107746078,LOC107561943,LOC107701510 coding downstream 178656 58947653 ~ 58952885 (-)
LOC103037326 enpp5,LOC107561943,LOC107701510,LOC107746078 coding downstream 189344 58934892 ~ 58942197 (-)
LOC103031445 thbs1b,thbs1,LOC103031445,LOC108410805,LOC107671781,LOC107721311,LOC107549089 coding downstream 537615 58582728 ~ 58593926 (-)
LOC103032305 LOC103032305,LOC108444535 coding downstream 629010 58498747 ~ 58502531 (-)
LOC103026850 LOC108435006,LOC107589054,LOC107723250,LOC107746162,LOC107697321,LOC104922452 coding upstream 226690 59358827 ~ 59434313 (-)
LOC103027424 si:ch211-278j3.3,LOC108435005,LOC108257871,LOC107723221,LOC107589055,LOC105897761 coding upstream 313374 59445511 ~ 59486743 (-)
eif2b4 eif2b4 coding upstream 430692 59562829 ~ 59573611 (-)
LOC103030505 LOC103030505,LOC108434978 coding upstream 467283 59599420 ~ 59608991 (-)
LOC107197813 NA coding upstream 567897 59700034 ~ 59704083 (-)
G29291 NA non-coding downstream 243132 58888118 ~ 58888409 (-)
G29279 NA non-coding downstream 268046 58862851 ~ 58863495 (-)
G29270 NA non-coding downstream 280190 58848687 ~ 58851351 (-)
G29260 NA non-coding downstream 311688 58818634 ~ 58819853 (-)
G29255 NA non-coding downstream 350467 58780689 ~ 58781074 (-)
G29370 NA non-coding upstream 1274 59133411 ~ 59133672 (-)
G29393 NA non-coding upstream 104360 59236497 ~ 59243835 (-)
G29417 NA non-coding upstream 192856 59324993 ~ 59325712 (-)
G29480 NA non-coding upstream 310642 59442779 ~ 59443002 (-)
G29492 NA non-coding upstream 422194 59554331 ~ 59559664 (-)
LOC103023855 xkr6b,xkr6,LOC103023855,LOC108435015,LOC107746102,LOC107701509,LOC108258067,LOC107589046,LOC107723320,LOC107684793 other downstream 45655 58998541 ~ 59085886 (-)
G29317 eif5,LOC103022293,LOC107561927,LOC107746071,LOC108435020,LOC107589079,LOC107701513,LOC107582488 other downstream 196752 58932963 ~ 58934789 (-)
LOC111189852 LOC108411318,LOC108257913,LOC107721335,LOC102302990,LOC102081001 other downstream 956837 58159207 ~ 58174704 (-)
LOC103041090 LOC103041090,LOC108424449 other downstream 1136065 57991641 ~ 57995476 (-)
ppp4r4 ppp4r4,LOC107711657 other downstream 1290223 57812262 ~ 57841318 (-)
G29478 NA other upstream 305463 59437600 ~ 59438298 (-)
snx17 snx17 other upstream 374789 59506926 ~ 59552910 (-)
LOC103034188 LOC108434976 other upstream 1017260 60149397 ~ 60162066 (-)
LOC103035785 ppm1a,LOC108434987,LOC108258036 other upstream 1219135 60351272 ~ 60364744 (-)
LOC111191938 NA other upstream 1236909 60369046 ~ 60369614 (-)

Expression


Co-expression Network