nme6 (nme6)


Basic Information

Item Value
gene id nme6
gene name nme6
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59586709 ~ 59598332 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39573
TTGTTCCTGAGGAGAATTGATTGACAGTAACAGTCATTAGTTTTAACAGCTTGAGGAAGAAGGACTCGTGTGATCTGTGGTTCTGGATCAGCAGATGAGTCATATCATCACAGTTCAGCAGACTCTAGAACAGACTCCTGATACTGAATCACCAGCGTTTGGAGACATTTGCCTGTAGGAGAGGCTGAGCTGCATCCTTTTGGAATGTAAAACTAGGTTCTGTGTCAGGTCATACATGGAGGATAACTGCTCACTTACTTGCAGACTGTTACTGTATCTATTTTTCTCTTGCAGGACGGTTCTTCTACCAGCGACTTGTTGAATTCATGTCAAGTGGTCCAATGAGAGCTTATATCTTGGCCAGAGAGGATGCGATCACTCGCTGGAGGGAATTGATGGGTCCTACTAAAGTGTATCGGGCTCGGTACACTTCGCCGAGCACCATCCGGGCACAGTATGGGCTCACGGACACCAGAAACACCACTCATGGTTCAGATTCGGAGGAGTCAGCCAAGAGAGAGATTGCCTTCTTCTTTCCGGAATTCAGTGCTGAGCAGtggctggaggaggaggagccgtGTTTTCGGGCAGGACACGCAGAATACGATCAGCACGGGCAAATCCATATGCCACTCAAACACGTCTGACCATCCATCTGCCTTCACCAAAGACTGGACTCATGCCCTTAAAAATTGAAAGCACTGCTTGTACTTGAATGATGTGTCTTTGTCTTGTCACATTGCTGTGGTGTGATCTCAGATCTCAGACCTGAATATTTATGTGAGCACTTGCACACTTGTACTGTTGTGCCAAAATAGAAGGTCCacattaaatatgttattttattcagtgtaaGATACAGCAGTACGGGATTTTGTGTTGATATTCAGTAGGCCTGAGTTTTAAAAAGGACTTGGCAATACGATATGTACCACGATACAGGGGTTTAGattcaaaatatcacaataaattgtGATATTATAACCAAGGAAATTTGATGTAAttgtttaaatcagattttaggaAAACCATCATAATATAAGAACACAATgtcatattaataaaat
>XM_015607684.2
ACCAACCCGCTTGTTTTCGGAAAAGCAAAATGGCAGCGCTCATACACGCTAGAGAGTGTACTCTGACAGAGAGCGAATGAAACGAGCCACAGTTGATCAGCAGGTTTATAGTCTTTAGTTACTGTAAATGTATATCAGGAGCGATAGAGAGCTCTTCAGCTTTAGGGGCGGTaaagtagagtacagtacagtacagtagagcaGGTTATATTGAGGAGGGCAGGTTAACTCGGCTTTAATGCGGACAGTGCTGAACAGCAGCTGAACAGCTAAATAAACTCACCGAGCCCGCAGTGAGAGAGTCACAGAGCTCCggtagaggagaggagagagagcggGGTTCAGCGGGGTTCAGAGTAAATCTGGGGGTAATGCTGTTGAGCTCACTGAGGAGAGCGAGGGTCCTACAGCTCACCCTTGCGGTCATCAAACCGGACGCTGTAGCTCATCCGCTCATACTGGAGGCTCTTCATCAGAGAATCCTAGAAAACGACTTCCTCATTGTCAGAAAAAAAGATCTGATATGGAGAATAGGAGATTCTGAAAGGTTTTACGCAGAACATGAAGGACGGTTCTTCTACCAGCGACTTGTTGAATTCATGTCAAGTGGTCCAATGAGAGCTTATATCTTGGCCAGAGAGGATGCGATCACTCGCTGGAGGGAATTGATGGGTCCTACTAAAGTGTATCGGGCTCGGTACACTTCGCCGAGCACCATCCGGGCACAGTATGGGCTCACGGACACCAGAAACACCACTCATGGTTCAGATTCGGAGGAGTCAGCCAAGAGAGAGATTGCCTTCTTCTTTCCGGAATTCAGTGCTGAGCAGtggctggaggaggaggagccgtGTTTTCGGGCAGGACACGCAGAATACGATCAGCACGGGCAAATCCATATGCCACTCAAACACGTCTGACCATCCATCTGCCTTCACCAAAGACTGGACTCATGCCCTTAAAAATTGAAAGCACTGCTTGTACTTGAATGATGTGTCTTTGTCTTGTCACATTGCTGTGGTGTGATCTCAGATCTCAGACCTGAATATTTATGTGAGCACTTGCACACTTGTACTGTTGTGCCAAAATAGAAGGTCCacattaaatatgttattttattcagtgtaaGATACAGCAGTACGGGATTTTGTGTTGATATTCAGTAGGCCTGAGTTTTAAAAAGGACTTGGCAATACGATATGTACCACGATACAGGGGTTTAGattcaaaatatcacaataaattgtGATATTATAACCAAGGAAATTTGATGTAAttgtttaaatcagattttaggaAAACCATCATAATATAAGAACACAATgtcatattaataaaatgtgagacaaaaaatgtggttttatgcattaataataacaattaaccACTTTCTGTCACCAAAAATAAACTATGTAGTATTCCAAAACAAAA

Function

symbol description
nme6 Predicted to enable nucleoside diphosphate kinase activity. Predicted to be involved in negative regulation of cell growth and negative regulation of mitotic nuclear division. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including eye; female organism; gill; gonad; and male organism. Orthologous to human NME6 (NME/NM23 nucleoside diphosphate kinase 6).

NR:

description
nucleoside diphosphate kinase 6-like

GO: NA

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
TU39573 False 1067 TUCP 0.43 3 59590989 59598241
XM_015607684.2 True 1431 mRNA 0.44 5 59586709 59598332

Neighbor

gene id symbol gene type direction distance location
LOC103030186 LOC108435004 coding upstream 83187 59488161 ~ 59503522 (+)
fndc4 fndc4,LOC107589087,LOC107723530,LOC107697298 coding upstream 233584 59297681 ~ 59353125 (+)
LOC103025639 blk,LOC108435007,LOC108258139,LOC107589086,LOC107684815,LOC107746144,LOC107701472,LOC107561930 coding upstream 311175 59251973 ~ 59275534 (+)
LOC111194377 NA coding upstream 343309 59239996 ~ 59243400 (+)
LOC111194376 NA coding upstream 356321 59228844 ~ 59230388 (+)
LOC103031439 LOC108434977 coding downstream 155144 59753476 ~ 59765073 (+)
LOC103031133 chrna2b,LOC108434998,LOC107697311,LOC107589091,LOC107723144,LOC107563692,LOC107746381,LOC107701496 coding downstream 169050 59767382 ~ 59786661 (+)
rhoj rhoj,LOC107743974,LOC108257930,LOC107697308,LOC107701469 coding downstream 462766 60061098 ~ 60091808 (+)
LOC103035162 LOC108434989,LOC108258176 coding downstream 667505 60265837 ~ 60273289 (+)
LOC103034839 six1b,six1,LOC108434988,LOC107589069,LOC107697302,LOC107563694 coding downstream 681507 60279839 ~ 60281890 (+)
G29448 NA non-coding upstream 66737 59507008 ~ 59519972 (+)
G29432 NA non-coding upstream 150334 59436160 ~ 59436375 (+)
G29409 NA non-coding upstream 273797 59312602 ~ 59312912 (+)
G29405 NA non-coding upstream 309872 59276607 ~ 59276837 (+)
G29388 NA non-coding upstream 342875 59236496 ~ 59243834 (+)
G29515 NA non-coding downstream 33372 59631704 ~ 59631907 (+)
G29516 NA non-coding downstream 33787 59632119 ~ 59632468 (+)
G29526 NA non-coding downstream 101731 59700063 ~ 59704110 (+)
G29558 NA non-coding downstream 253739 59852071 ~ 59852524 (+)
G29560 NA non-coding downstream 258909 59857241 ~ 59857582 (+)
atraid atraid other upstream 26947 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 357869 59221266 ~ 59228840 (+)
G29382 NA other upstream 365673 59220532 ~ 59221036 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other upstream 474394 59064473 ~ 59112315 (+)
G29155 foxq1 other upstream 1167892 58417394 ~ 58418817 (+)
c3h14orf2 NA other downstream 922010 60520342 ~ 60525051 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other downstream 2327748 61926080 ~ 61936083 (+)
LOC103045797 NA other downstream 3223411 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 3327686 62926018 ~ 62931133 (+)
G30362 NA other downstream 3737402 63335734 ~ 63345693 (+)

Expression


Co-expression Network