G29516


Basic Information

Item Value
gene id G29516
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59632119 ~ 59632468 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39592
TTTTGGTTTAGCCCGGGGGGTATTTAAGGGGTATAGGGTGAGCATTACGGGAGGAGAGGTAGATTGAGTTCTCTGAGACGGACATGTTTGCTGGAGCTAAAAAGCTTAAGAACTCTATTAAGGACTGGGCTAGCGTTCTTACCCGTAAGTCTTAACTAGTGGTAGCATTATCCACTTATCTCTGCCTACTCCTAAAAataagtgtatatagtgtgttgtattcttttttgtttttttttgtcaataaacTGTTATAGCTGAACAGTTTACAACTGCTCCAAGCGCCTCCTTTGCCTTTACGACGCTATTCGACAGCGGTACCTCCTGACCACACCACCCACACTACCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39592 True 350 lncRNA 0.42 1 59632119 59632468

Neighbor

gene id symbol gene type direction distance location
LOC103030186 LOC108435004 coding upstream 128597 59488161 ~ 59503522 (+)
fndc4 fndc4,LOC107589087,LOC107723530,LOC107697298 coding upstream 278994 59297681 ~ 59353125 (+)
LOC103025639 blk,LOC108435007,LOC108258139,LOC107589086,LOC107684815,LOC107746144,LOC107701472,LOC107561930 coding upstream 356585 59251973 ~ 59275534 (+)
LOC111194377 NA coding upstream 388719 59239996 ~ 59243400 (+)
LOC111194376 NA coding upstream 401731 59228844 ~ 59230388 (+)
LOC103031439 LOC108434977 coding downstream 121008 59753476 ~ 59765073 (+)
LOC103031133 chrna2b,LOC108434998,LOC107697311,LOC107589091,LOC107723144,LOC107563692,LOC107746381,LOC107701496 coding downstream 134914 59767382 ~ 59786661 (+)
rhoj rhoj,LOC107743974,LOC108257930,LOC107697308,LOC107701469 coding downstream 428630 60061098 ~ 60091808 (+)
LOC103035162 LOC108434989,LOC108258176 coding downstream 633369 60265837 ~ 60273289 (+)
LOC103034839 six1b,six1,LOC108434988,LOC107589069,LOC107697302,LOC107563694 coding downstream 647371 60279839 ~ 60281890 (+)
G29515 NA non-coding upstream 212 59631704 ~ 59631907 (+)
G29448 NA non-coding upstream 112147 59507008 ~ 59519972 (+)
G29432 NA non-coding upstream 195744 59436160 ~ 59436375 (+)
G29409 NA non-coding upstream 319207 59312602 ~ 59312912 (+)
G29405 NA non-coding upstream 355282 59276607 ~ 59276837 (+)
G29526 NA non-coding downstream 67595 59700063 ~ 59704110 (+)
G29558 NA non-coding downstream 219603 59852071 ~ 59852524 (+)
G29560 NA non-coding downstream 224773 59857241 ~ 59857582 (+)
G29567 NA non-coding downstream 255388 59887856 ~ 59985113 (+)
G29580 NA non-coding downstream 463687 60096155 ~ 60097909 (+)
nme6 nme6 other upstream 33787 59586709 ~ 59598332 (+)
atraid atraid other upstream 72357 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 403279 59221266 ~ 59228840 (+)
G29382 NA other upstream 411083 59220532 ~ 59221036 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other upstream 519804 59064473 ~ 59112315 (+)
c3h14orf2 NA other downstream 887874 60520342 ~ 60525051 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other downstream 2293612 61926080 ~ 61936083 (+)
LOC103045797 NA other downstream 3189275 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 3293550 62926018 ~ 62931133 (+)
G30362 NA other downstream 3703266 63335734 ~ 63345693 (+)

Expression


Co-expression Network