G29559


Basic Information

Item Value
gene id G29559
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59852055 ~ 59852468 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39642
ccagcttgtgactcagttagcttaactttagaattagctagatagatattcagggtttgagaaaaatctacatacatataatgccctgccctgatgtgcctgatcagccaaaacctataatttccaaactctattagttcagggctagttttagggtttgttagaatttgtttaaatctcaagtattgtggtgtaatgtattatttagaaggggtagaagagatggttgagctggagagagagagaaaatgtgaagagggctgaaattaactgaactgatcaggagtggactgaacgatagaaagaagtattaatgaaagattattaattgtgtaggccccttaggactattatttacttatggaatatatctgatccatgtcctttttgtaaatttgtgcacccttcaatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39642 True 414 lncRNA 0.36 1 59852055 59852468

Neighbor

gene id symbol gene type direction distance location
LOC103031863 LOC108434997,LOC108258133,LOC105920313 coding downstream 21164 59792576 ~ 59830891 (-)
LOC107197813 NA coding downstream 147972 59700034 ~ 59704083 (-)
LOC103030505 LOC103030505,LOC108434978 coding downstream 243064 59599420 ~ 59608991 (-)
eif2b4 eif2b4 coding downstream 278444 59562829 ~ 59573611 (-)
LOC103027424 si:ch211-278j3.3,LOC108435005,LOC108257871,LOC107723221,LOC107589055,LOC105897761 coding downstream 365312 59445511 ~ 59486743 (-)
LOC103032183 kcnh5a,LOC108434995,LOC107701494,LOC107563685,LOC107743971,LOC107707078,LOC107697309,LOC108257569 coding upstream 29672 59882140 ~ 60059600 (-)
LOC103032801 ppp2r5ea,LOC103032801,LOC108434994,LOC108257929,LOC107697307,LOC107701493,LOC107707079,LOC107743972,LOC107563687 coding upstream 245020 60097488 ~ 60123478 (-)
LOC103033561 NA coding upstream 275579 60128047 ~ 60145920 (-)
LOC103033873 hif1a,LOC107589062,LOC107743977,LOC107563689 coding upstream 310872 60163340 ~ 60177354 (-)
LOC103034514 LOC108434990,LOC108258108 coding upstream 332226 60184694 ~ 60219056 (-)
G29509 NA non-coding downstream 244209 59607175 ~ 59607846 (-)
LOC111190079 NA non-coding downstream 273660 59576238 ~ 59578395 (-)
G29494 NA non-coding downstream 277519 59574328 ~ 59574536 (-)
G29492 NA non-coding downstream 292391 59554331 ~ 59559664 (-)
G29480 NA non-coding downstream 409053 59442779 ~ 59443002 (-)
G29563 NA non-coding upstream 5598 59858066 ~ 59858339 (-)
G29608 NA non-coding upstream 221604 60074072 ~ 60091759 (-)
G29681 NA non-coding upstream 531535 60384003 ~ 60384462 (-)
G29684 NA non-coding upstream 535512 60387980 ~ 60388361 (-)
G29702 NA non-coding upstream 543181 60395649 ~ 60396246 (-)
snx17 snx17 other downstream 299145 59506926 ~ 59552910 (-)
G29478 NA other downstream 413757 59437600 ~ 59438298 (-)
LOC103023855 xkr6b,xkr6,LOC103023855,LOC108435015,LOC107746102,LOC107701509,LOC108258067,LOC107589046,LOC107723320,LOC107684793 other downstream 766169 58998541 ~ 59085886 (-)
G29317 eif5,LOC103022293,LOC107561927,LOC107746071,LOC108435020,LOC107589079,LOC107701513,LOC107582488 other downstream 917266 58932963 ~ 58934789 (-)
LOC111189852 LOC108411318,LOC108257913,LOC107721335,LOC102302990,LOC102081001 other downstream 1677351 58159207 ~ 58174704 (-)
LOC103034188 LOC108434976 other upstream 296929 60149397 ~ 60162066 (-)
LOC103035785 ppm1a,LOC108434987,LOC108258036 other upstream 498804 60351272 ~ 60364744 (-)
LOC111191938 NA other upstream 516578 60369046 ~ 60369614 (-)
LOC103029720 jag2,jag2b,LOC107718403,LOC107755239 other upstream 1440408 61292876 ~ 61364878 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other upstream 1979373 61831841 ~ 61890729 (-)

Expression


Co-expression Network