G29641


Basic Information

Item Value
gene id G29641
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 60287867 ~ 60288093 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39743
GTGATGACCGGAGAGCAACTCTAGAGCAACAGCAGAAAACACTggcacactcaaacacacacacacacacacacacacatgcactacCATACATACCTGCACAACAATGCAGTGGTTCTACTGAACAATACAATTTCAGACAAACTTGGGTCACTTTCCCTAGAGCCACATTCTAATATGCCCTAAATCCTCAATAATAAAACTGcaacaaaaatgtattactaTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39743 True 227 lncRNA 0.41 1 60287867 60288093

Neighbor

gene id symbol gene type direction distance location
LOC103034839 six1b,six1,LOC108434988,LOC107589069,LOC107697302,LOC107563694 coding upstream 5977 60279839 ~ 60281890 (+)
LOC103035162 LOC108434989,LOC108258176 coding upstream 14578 60265837 ~ 60273289 (+)
rhoj rhoj,LOC107743974,LOC108257930,LOC107697308,LOC107701469 coding upstream 196059 60061098 ~ 60091808 (+)
LOC103031133 chrna2b,LOC108434998,LOC107697311,LOC107589091,LOC107723144,LOC107563692,LOC107746381,LOC107701496 coding upstream 501206 59767382 ~ 59786661 (+)
LOC103031439 LOC108434977 coding upstream 522794 59753476 ~ 59765073 (+)
LOC103036511 rtn1b,LOC108434986,LOC107560379,LOC108257846,LOC105897731,LOC107589072 coding downstream 107485 60395578 ~ 60462048 (+)
LOC111190190 NA coding downstream 142768 60430861 ~ 60443507 (+)
rd3l rd3l coding downstream 197810 60485903 ~ 60490965 (+)
ppp1r13b ppp1r13bb,LOC108434983 coding downstream 244649 60532742 ~ 60599366 (+)
brf1 brf1,brf1b,LOC107701485,LOC107718407,LOC107683968 coding downstream 414989 60703082 ~ 60793830 (+)
G29639 NA non-coding upstream 1924 60282585 ~ 60285943 (+)
G29596 hif1a,LOC107589062,LOC107743977,LOC107563689 non-coding upstream 110523 60165466 ~ 60177344 (+)
G29594 LOC108434976 non-coding upstream 125710 60157270 ~ 60162157 (+)
G29591 LOC108434993 non-coding upstream 156393 60128061 ~ 60131474 (+)
G29580 NA non-coding upstream 189958 60096155 ~ 60097909 (+)
G29662 NA non-coding downstream 63225 60351318 ~ 60353130 (+)
G29663 NA non-coding downstream 68384 60356477 ~ 60356882 (+)
G29679 NA non-coding downstream 93948 60382041 ~ 60382256 (+)
G29691 NA non-coding downstream 175884 60463977 ~ 60519867 (+)
G29772 NA non-coding downstream 401908 60690001 ~ 60690253 (+)
nme6 nme6 other upstream 689535 59586709 ~ 59598332 (+)
atraid atraid other upstream 728105 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 1059027 59221266 ~ 59228840 (+)
G29382 NA other upstream 1066831 59220532 ~ 59221036 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other upstream 1175552 59064473 ~ 59112315 (+)
c3h14orf2 NA other downstream 232249 60520342 ~ 60525051 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other downstream 1637987 61926080 ~ 61936083 (+)
LOC103045797 NA other downstream 2533650 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 2637925 62926018 ~ 62931133 (+)
G30362 NA other downstream 3047641 63335734 ~ 63345693 (+)

Expression


Co-expression Network