G29691


Basic Information

Item Value
gene id G29691
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 60463977 ~ 60519867 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39800
cttaaaagtgaagccaccacaggtcgggcgccccctgctgttcggctgcagaaagctgtgtaactccacccatccccataggtttcaatggcaaaacagacaactttcaatcacgtttttttctaatatactgtaattctacctccattatttaaatgtaacagctagtgtaacctctgcttatattgtcaaatttttatatccccacagaattcggtttttaaaactttattcggctctattcaaaaaaggtgtggttatggtaaaagggctgcttatgggcgggaccaataacagaccgtcagctccgccccgctctgcagtctgtgacgcgaggcagccctcaggggcggggttattcaaatgagtaggttgctatccacagtctttctccctcctctggtctctactgcgcagactcgggtatcaggatcgccaacatggcggaagattttggcttcatttacattgaatgaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39800 True 478 lncRNA 0.46 2 60463977 60519867

Neighbor

gene id symbol gene type direction distance location
LOC103036511 rtn1b,LOC108434986,LOC107560379,LOC108257846,LOC105897731,LOC107589072 coding upstream 1929 60395578 ~ 60462048 (+)
LOC111190190 NA coding upstream 20470 60430861 ~ 60443507 (+)
LOC103034839 six1b,six1,LOC108434988,LOC107589069,LOC107697302,LOC107563694 coding upstream 182087 60279839 ~ 60281890 (+)
LOC103035162 LOC108434989,LOC108258176 coding upstream 190688 60265837 ~ 60273289 (+)
rhoj rhoj,LOC107743974,LOC108257930,LOC107697308,LOC107701469 coding upstream 372169 60061098 ~ 60091808 (+)
ppp1r13b ppp1r13bb,LOC108434983 coding downstream 12875 60532742 ~ 60599366 (+)
brf1 brf1,brf1b,LOC107701485,LOC107718407,LOC107683968 coding downstream 183215 60703082 ~ 60793830 (+)
LOC103031412 NA coding downstream 475060 60994927 ~ 61163598 (+)
trnad-guc NA coding downstream 1173346 61693213 ~ 61693284 (+)
l3hypdh l3hypdh,LOC107684001 coding downstream 1174088 61693955 ~ 61704828 (+)
G29679 NA non-coding upstream 81721 60382041 ~ 60382256 (+)
G29663 NA non-coding upstream 107095 60356477 ~ 60356882 (+)
G29662 NA non-coding upstream 110847 60351318 ~ 60353130 (+)
G29641 NA non-coding upstream 175884 60287867 ~ 60288093 (+)
G29639 NA non-coding upstream 178034 60282585 ~ 60285943 (+)
G29772 NA non-coding downstream 170134 60690001 ~ 60690253 (+)
G29775 xrcc3 non-coding downstream 180478 60700345 ~ 60702123 (+)
G29812 NA non-coding downstream 307870 60827737 ~ 60827940 (+)
G29825 NA non-coding downstream 409255 60929122 ~ 60930577 (+)
G29916 jag2,jag2b,LOC106571712,LOC107718403 non-coding downstream 787352 61307219 ~ 61309843 (+)
nme6 nme6 other upstream 865645 59586709 ~ 59598332 (+)
atraid atraid other upstream 904215 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 1235137 59221266 ~ 59228840 (+)
G29382 NA other upstream 1242941 59220532 ~ 59221036 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other upstream 1351662 59064473 ~ 59112315 (+)
c3h14orf2 NA other downstream 475 60520342 ~ 60525051 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other downstream 1406213 61926080 ~ 61936083 (+)
LOC103045797 NA other downstream 2301876 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 2406151 62926018 ~ 62931133 (+)
G30362 NA other downstream 2815867 63335734 ~ 63345693 (+)

Expression


Co-expression Network