G58005


Basic Information

Item Value
gene id G58005
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13040326 ~ 13047175 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66059
CAGTTTTCCAAGCACAACACAGTGAGACTAATGAATGTAGGACAGCTTCTTTATTATTACTCTAATGAAAAAAGTAATAATTTTTATGTGCTTGTCACAAACTTAAAGAACAAAAATGTCACAGTGTCCAATAACCTTCAAAGGGCATAATTACCAATAATTGTTGTTATATAAAAAGAAATTTACAAACAAATTACAAACAATACAACAAATACTATAGAGATACAAATTAAAAAACTTGTTTTTCAGATACAGTAGGTTTATTTACCATGTATACATTTATTTAACATATTTTGTTGTTTTATTAATATTAATGACAAATATAGACTGCGGTCTCTTTAAGACCGAATCCATGGATACTGACACATATCCTGTTTTCACCCAAATGTTTACGTCCACTTAAGCCATAACCGACTGTATTTACGTGAGATACTCCACACGATGGACATTTTGACAACTATGTGTGCATCTGACCATTCAGGCGCGAGGAGAACTGATCGCGCGCTGTCTGAGAGAACTGGGATCGCGCGCGAGAGAGAGCGCTTCTGTTCTGTGTCATTCAGCGATAACGAGCCTAATCGATAACGAATTGTGATTGAAAGCATGCAGTTCGCAATGTGTGTGTTGTCATCATTAATTTTGAAGTATTTCCACACCTCTGAGGCTGACATTGTGTCTGCTGCTGCCGCCGGTGTCTCTGTGCACGGGAAATTCTGTCAGTTGCGTCACGTGAGGTATCGGTCTTTGGTATATTTTTACGAGTACGAGTACAAGTACATGAGCTTGGTATCGGCCGATACCGATACTGGTATCGGTATCGGTGCATCCCTATAAAAAACAAAACAAACAAACAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66059 True 859 lncRNA 0.38 2 13040326 13047175

Neighbor

gene id symbol gene type direction distance location
CI01000009_12854692_12859028 NA coding upstream 179295 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 386469 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 535432 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 604435 12432538 ~ 12436017 (+)
CI01000009_12387605_12388405 LRRC3 coding upstream 649661 12385222 ~ 12390665 (+)
CI01000009_13194613_13197758 NA coding downstream 147262 13194437 ~ 13199701 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 345131 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 501828 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 649350 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 705249 13752424 ~ 13753823 (+)
G57739 NA non-coding upstream 114084 12923993 ~ 12926242 (+)
G57756 NA non-coding upstream 445581 12528533 ~ 12594745 (+)
G57911 NA non-coding upstream 558294 12481744 ~ 12482032 (+)
G57903 NA non-coding upstream 565796 12473935 ~ 12474530 (+)
G57900 NA non-coding upstream 569722 12470282 ~ 12470604 (+)
G58023 NA non-coding downstream 76002 13123177 ~ 13124892 (+)
G58088 NA non-coding downstream 177665 13224840 ~ 13225681 (+)
G58103 NA non-coding downstream 199166 13246341 ~ 13248989 (+)
G58118 NA non-coding downstream 222231 13269406 ~ 13269639 (+)
G58153 NA non-coding downstream 288460 13335635 ~ 13335862 (+)
G57701 NA other upstream 17188 13006643 ~ 13023138 (+)
G57691 NA other upstream 121861 12906444 ~ 12918465 (+)
G57682 NA other upstream 147987 12825469 ~ 12892339 (+)
G57811 NA other upstream 1105075 11933942 ~ 11935251 (+)
G58028 NA other downstream 93203 13140378 ~ 13143608 (+)
G58382 NA other downstream 986384 14039757 ~ 14039901 (+)
G58455 NA other downstream 1199520 14246695 ~ 14258526 (+)
G58558 NA other downstream 1449761 14496936 ~ 14501514 (+)
G58649 NA other downstream 1602549 14649724 ~ 14652022 (+)

Expression


Co-expression Network