G30066


Basic Information

Item Value
gene id G30066
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 62178192 ~ 62178433 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40303
ttttactgtttctgtaaacaaataaaggttttaaccccactaaccggataatacagctcactacagttcatctttcagcccaagcagctaacagcagcaggttagaacagccgacacggaggcactgctcggattacattataaacaggtcagttagcgcgctgctaacctcaggatgtttataactacggagtttagtggacacaccacggccgccaggtaagtcttttaaaggctactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40303 True 242 lncRNA 0.45 1 62178192 62178433

Neighbor

gene id symbol gene type direction distance location
LOC103030167 LOC108414838,LOC107684806,LOC107723431 coding downstream 120329 62046691 ~ 62057863 (-)
LOC103031849 kctd1,LOC108414594,LOC103031849,LOC108442723,LOC106599692,LOC107723550,LOC107561046,LOC107684804,LOC107746021,LOC107701518 coding downstream 138353 62009807 ~ 62039839 (-)
LOC103031530 NA coding downstream 169566 61996353 ~ 62008626 (-)
LOC103042845 daam1b,LOC108412077,LOC107755211,LOC108257948,LOC107701451 coding downstream 362606 61707691 ~ 61815586 (-)
nudt14 nudt14,LOC107683965,LOC107755236,LOC107718404,LOC107701483 coding downstream 747913 61369995 ~ 61430279 (-)
LOC111191939 NA coding upstream 34727 62213160 ~ 62214666 (-)
LOC103030680 cdh2,LOC108416271,LOC108258170,LOC107561048,LOC107746014,LOC107701519,LOC107571545 coding upstream 122714 62301147 ~ 62362260 (-)
LOC103034091 NA coding upstream 620186 62798619 ~ 62817748 (-)
b4galt6 b4galt6,LOC107712262,LOC107687169,LOC107712895 coding upstream 764640 62943073 ~ 62962918 (-)
LOC103046711 LOC108414824 coding upstream 800879 62979312 ~ 63007981 (-)
G30058 NA non-coding downstream 67723 62110268 ~ 62110469 (-)
G30047 psma8,LOC103029839,LOC107572146,LOC100304914,LOC107723426 non-coding downstream 187532 61984674 ~ 61990660 (-)
G30021 LOC108414863 non-coding downstream 194641 61979563 ~ 61983551 (-)
G30014 NA non-coding downstream 198730 61950417 ~ 61979462 (-)
G30083 NA non-coding upstream 54495 62232928 ~ 62236594 (-)
G30081 NA non-coding upstream 55385 62233818 ~ 62235787 (-)
G30093 NA non-coding upstream 81689 62260122 ~ 62260326 (-)
G30150 NA non-coding upstream 539860 62718293 ~ 62751535 (-)
G30141 NA non-coding upstream 558774 62737207 ~ 62744288 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other downstream 287463 61831841 ~ 61890729 (-)
LOC103029720 jag2,jag2b,LOC107718403,LOC107755239 other downstream 813314 61292876 ~ 61364878 (-)
LOC111191938 NA other downstream 1808578 60369046 ~ 60369614 (-)
LOC103035785 ppm1a,LOC108434987,LOC108258036 other downstream 1813448 60351272 ~ 60364744 (-)
LOC103034188 LOC108434976 other downstream 2016126 60149397 ~ 60162066 (-)
fryl fryl,LOC107683942,LOC107665346 other upstream 958518 63136951 ~ 63288108 (-)
G30376 NA other upstream 1151611 63330044 ~ 63334846 (-)
usp46 usp46 other upstream 1255359 63433792 ~ 63485021 (-)
scfd2 scfd2 other upstream 1349848 63528281 ~ 63763673 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other upstream 2596251 64774684 ~ 64799176 (-)

Expression


Co-expression Network