G30168


Basic Information

Item Value
gene id G30168
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 62803591 ~ 62804754 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40437
AGCAGCAGGAGAAGCAGCAGGGCCAGCAGCATGGCGAGAACGGCCCACACTCCCAGTTTGGCAGAAATCTTCTGAGCTGCACACTCTCCATCCCTTACACATGTGCACACTTGGATATTTACAGTCTGCTCTGTCCCTTCACCTTGGAGGTCCTTCACAATCAAGGGGACCTTGTACTGGCCATTCGGCAAGTCCTCGGCCTGCTCCAGGACCACTGAGGTACCTGGCTTGGGATCCTTGATCTTCCATTTCCCATCATTTCCTGGCCCTAATTCAAAGGTAAAAGGGCCAGCATACGGAGATTTATCAGAGTCCACAGCTTCAACGGTCGTAGAGctcctttgattttcttttgaGCACACCGTCCGGTCTGGTACTGGGATCACCGGGTAGTTATCATTTACATCCTCAATCAGGATCACGACTGTACCTGTACCAGTCTTCTGACCTAGGAAATGGGAAGGATTGAACATGatgtcattttttattacaagCATCATTGTTATTTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40437 True 513 lncRNA 0.49 2 62803591 62804754

Neighbor

gene id symbol gene type direction distance location
LOC103033766 LOC103033766,LOC108416260 coding upstream 10003 62791748 ~ 62793588 (+)
LOC103029839 psma8,LOC103029839,LOC107572146,LOC100304914,LOC107723426 coding upstream 812927 61984639 ~ 61990664 (+)
LOC103031223 NA coding upstream 820132 61950471 ~ 61983459 (+)
l3hypdh l3hypdh,LOC107684001 coding upstream 1098763 61693955 ~ 61704828 (+)
trnad-guc_1 NA coding upstream 1106720 61696800 ~ 61696871 (+)
LOC103034413 NA coding downstream 64357 62869111 ~ 62885298 (+)
LOC103046101 LOC108414576,LOC108416204 coding downstream 84114 62888868 ~ 62907516 (+)
LOC103046397 NA coding downstream 104337 62909091 ~ 62925805 (+)
ttr ttr coding downstream 130931 62935685 ~ 62940874 (+)
anapc4 anapc4,LOC107665412,LOC107683992 coding downstream 261766 63066520 ~ 63086982 (+)
G30138 NA non-coding upstream 64679 62737567 ~ 62738912 (+)
G30130 NA non-coding upstream 151654 62649364 ~ 62651937 (+)
G30125 NA non-coding upstream 215535 62587723 ~ 62588056 (+)
G30122 NA non-coding upstream 241511 62561878 ~ 62562080 (+)
G30110 NA non-coding upstream 408430 62394920 ~ 62395161 (+)
G30280 NA non-coding downstream 312108 63116862 ~ 63117415 (+)
G30311 NA non-coding downstream 334544 63139298 ~ 63142668 (+)
G30314 NA non-coding downstream 344912 63149666 ~ 63150215 (+)
G30335 NA non-coding downstream 459196 63263950 ~ 63288134 (+)
LOC111191941 NA non-coding downstream 493109 63297863 ~ 63298732 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 867508 61926080 ~ 61936083 (+)
c3h14orf2 NA other upstream 2278540 60520342 ~ 60525051 (+)
nme6 nme6 other upstream 3205259 59586709 ~ 59598332 (+)
atraid atraid other upstream 3243829 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 3574751 59221266 ~ 59228840 (+)
LOC103045797 NA other downstream 16989 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 121264 62926018 ~ 62931133 (+)
G30362 NA other downstream 530980 63335734 ~ 63345693 (+)
kit kit other downstream 1426490 64231244 ~ 64269695 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 2217665 65022419 ~ 65046978 (+)

Expression


Co-expression Network