LOC103035278


Basic Information

Item Value
gene id LOC103035278
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 62926018 ~ 62931133 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40501
GAAGATGTAGCTTCTGACGCAAAGGAGGATGTAGCTTCTGACTCAAATAAGTAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGCAGCTTTTAACTCAAAGGAAGATGTTGGGGATTTAATTGTAAATGTTGAAAGACCAAAACAAGATACTCATTAACATCTTATtaatgtgGGTGTCAACTGGTTAGAAGACATCAGTTTGGCAGTGGACAGTGATGCAATTCATACTGGAGAAGAATATAAATTGACCAGCCTCAAGTCAAAAAAAGAA
>XM_022678418.1
ATGACCCTGGATGTAGATGCAGAAACAGGGGATACAACTGAGCTCCAGATACCTTTGCTTGCTGATGAGATGAAGGAAGACCCACATCCACAAAACTTAGAGAATGCAAAGATCAATGAATATAGCATTAATGATGGTAGTGTGACTTGCAGTCTGTTACAGGAGGAAAGTGTAACAGTGCCAAAGACAAAGGAAATCAGTTCTGAACAAAGTCTGCTTACTCTTGATCTTGATGAAGACACTCTTAATGAAGAGTTGGCATCTTCTAAAACAGAAAAGGATGATGTTGGACATGGACTTCATTCAGGCATAGAGATACCACAGGACACACCTGCAATGGTCGAAGAATTGTGCCAAACGGTGGCAAAGAGACATTTGGGAAGGACCATGGAAATACATTCTGAACAAAGCCTCGCTACTCTTGTTCCTGAGAAAGACAACACAGTGTTGGCAGCTTCTGACTCAAAGGAGGATGTAGCTTCTGACCCAAATAAGGAAGATGCAGCTTCTGACTCAAACAAGGAAGATGTAGCTTGCGACTCAAAAGAAGATGTAGTTTCTGACTCAAAAGAAGATATAGCTTGTGACTTAAAGGAAGATGTAGCTTGTGACTCAAAGGAAGCTGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTGTGACTCAAAGGAAGCTGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACGCAAAGGAGGATGAATATGAAGCTTCTGACTCAAACGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTCTGACGCAAAGGAGGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTGTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTGTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGAAGATGAAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGAAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTGTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGAGGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACGCAAAGGAGGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGTAGCTTGCGACTCAAAAGAAGATGTAGCTTCTGACGCAAAGGAGGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACGCAAAGGAGGATGAAGATGTAGCTTCTGACGCAAAGGAGGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACACAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACACAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACACAAAAGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGCAGCTTTTAACTCAAAGGAAGATGTTGGGGATTTAATTGAAGATGCAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACACAAAAGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAATCAGGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAGGAAGATGCAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAAAGAAGATGTAGCTTGTGACTCAAAGGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAAGAAGATGTAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAATAAGGAAGATGAAGCTTCTGACTCAAAGGAAGATGTAGCTTCTGACACAAAAGAAGATGTAGCTTatgcaaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40501 False 300 lncRNA 0.37 3 62928802 62929726
XM_022678418.1 True 4212 mRNA 0.41 7 62926018 62931133

Neighbor

gene id symbol gene type direction distance location
LOC103046397 NA coding upstream 213 62909091 ~ 62925805 (+)
LOC103046101 LOC108414576,LOC108416204 coding upstream 18502 62888868 ~ 62907516 (+)
LOC103034413 NA coding upstream 40720 62869111 ~ 62885298 (+)
LOC103033766 LOC103033766,LOC108416260 coding upstream 132430 62791748 ~ 62793588 (+)
LOC103029839 psma8,LOC103029839,LOC107572146,LOC100304914,LOC107723426 coding upstream 935354 61984639 ~ 61990664 (+)
ttr ttr coding downstream 4552 62935685 ~ 62940874 (+)
anapc4 anapc4,LOC107665412,LOC107683992 coding downstream 135387 63066520 ~ 63086982 (+)
slain2 slain2 coding downstream 156847 63087980 ~ 63111659 (+)
slc10a4 slc10a4 coding downstream 192173 63123306 ~ 63131100 (+)
zar1 zar1 coding downstream 201827 63132960 ~ 63134737 (+)
G30168 NA non-coding upstream 121264 62803591 ~ 62804754 (+)
G30138 NA non-coding upstream 187106 62737567 ~ 62738912 (+)
G30130 NA non-coding upstream 274081 62649364 ~ 62651937 (+)
G30125 NA non-coding upstream 337962 62587723 ~ 62588056 (+)
G30122 NA non-coding upstream 363938 62561878 ~ 62562080 (+)
G30280 NA non-coding downstream 185729 63116862 ~ 63117415 (+)
G30311 NA non-coding downstream 208165 63139298 ~ 63142668 (+)
G30314 NA non-coding downstream 218533 63149666 ~ 63150215 (+)
G30335 NA non-coding downstream 332817 63263950 ~ 63288134 (+)
LOC111191941 NA non-coding downstream 366730 63297863 ~ 63298732 (+)
LOC103045797 NA other upstream 72730 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 989935 61926080 ~ 61936083 (+)
c3h14orf2 NA other upstream 2400967 60520342 ~ 60525051 (+)
nme6 nme6 other upstream 3327686 59586709 ~ 59598332 (+)
atraid atraid other upstream 3366256 59554285 ~ 59559762 (+)
G30362 NA other downstream 404601 63335734 ~ 63345693 (+)
kit kit other downstream 1300111 64231244 ~ 64269695 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 2091286 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 2146647 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 2167369 65098502 ~ 65098573 (+)

Expression


Co-expression Network