G58028


Basic Information

Item Value
gene id G58028
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13140378 ~ 13143608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66091
TGCTGTCTGACAGCCAGCTTTCTGTTTGTGTGATTCAGATGTGTGCATTTAGAAAATCATAAATTAGAAGTTTAAATTGATATAGCTTTAAAACGCATGGAAATAATAAACTTTTGTGAAGAAGAAAGACTACACTGTCCATGAGCGTGATCGCTATATTGATGATAATCAAAACCAATCATTTGTCTTGTTAGTATACGGCACAGTATCCGATGCAGGCAGGAGACAGGGTTGGCAGATTTTCACAACAAAACCCACCCAATTGCTACTCAAAACTTGCCCGAAACTAGGCCGATCACATTTCAAGAAGGGGCGTGTGGGTGGGGGTGGGGGTGATATTTGGGGTGATATTTAGCCCCCTGAATAAATATCATGTTATTTGGTGTCGCTTCATCCCGCGGACATGAAAAACAACCTGCGGCAACAGTGTTAAAGTAGCCCAATTCCACAGGAAAACCGCAAACTTGGCAACACTGGCAGGAGCTGTGATCGTGGAAAGGGGGCAGGGAGCAGCAGGTCATGTGCATTTAAAGGCACGAAAACATGTTTTTGCTTGCTCTCAGAAATGGGTCTTTATAACATGGTATATATAAATGATCTGTGATATATTTTAAGCTGAAACTTCACAGACACATTATGGGGACACCTGGGACTTAAATCTTGTATAAAAGAGCATAGAAGGTCCCCCTTTAAATTTACATTTAATTAAAAAATTAAAGATTGGCATATACCACATAGCAACAACCTGGCAACCATCTAGAATTCCCTAGCAATTTTTTTTTTTCATAACATGCATTCATAACATGTAAAAATAAATGCAGAAATAATAGAAATAGCAGAAACATACAACTAAATATAAAGACATACTATGCTAGAAGTGGTGTACAGAATTACATAAATATGCATTCTGTTGAAAAAAACAAACAAACAAACAAAAAGTCGCCAGACAGCATTTTTTTTGAAAACCACTGATCTGAACGAATCTGAATATCATTGTTATTTCACGCTACTGTGGGAATATTTTACAGTACAAGAAGAGAGGAATATCACACCCTATTTATCTCATCTGTTTATGGTGTTTTATTTTACCGAAATGCCCATAAGAAACTTCACAGCGGCACACTTAGACTAATTATGGAAAGAAACGCACTGAGTGGAACTACTGCTTCCCTCAAAACTTCATTCGAGCTTGGCTGGGGATGTGTTCAACCTTTAGTTGCACAATGTTTTTCCCCTCTGGCAACAGGATTGGATGACACAGTGAATCCAGAGCGTGCGCTAAAGTATGGGATTAAATTACATCGCAGGACTGTGGCAAAATGAAAAGGCGTTTGAGCTTTAATAAAGTCGAGGATAAAGTTTGTAGCTTCCGAGGGTGAAGGCTAATCTACATGAGCAAGCTGCGAGACCAATACGAGCCATTTTGCCTTGTGTATAATGTGTGCCGATCTCGGTTCTCCTGGAACATGAAATGGTAACAGCACAGCGCTTGACAAACACAGCATCTTCAGGCCTGCGGAGAACGAAGGTAAACACGGGACGCGGGCTGATTCGTTCTGACACGCCAACCAGAGCATCACTTCCACTTAAGCAAGATGTGCTTTGGACTGGGCCTGCAGATGAGCATCTCCGGGGAGCAGGGAGAGCAGGAGAGACAGCTCTATCGATGGAGATCACAACGTGGCAACACATGCACCCAGAATTAGCATCAAAGAGCTTGGCAGTCTGGGGAACATCCGTTGACACTTCTGCTCGCCCCACGCTAGCTCAGATACGCCGCTTAATCTTAAAAGCATTGTTCAAATGGGCGATTGCGAGAGGAAACTGTTTTAAATTATCGCAAGGAGGGCAGTCATTTCACTTTCAGCGTTTATTGTGCTTGTTTGGAGCATGCGAGAGAGAGAGAGAGAGAGAGGGGGGAAGACGATAACAGGAAGCCAAGACAAGTTAATCTCTAGCAGTCGCTTCAATTCAGAAGCACATAGGCTGTGTTGGAAAATGAGAGTTTCAAACTCGATAGCAATCAAGCAATTATGCACCGCAGGAGGGAACAACAGGACGGCTGGGACACCCAGCGGCCACCCCACCGAGACAACAGGACCATGTCTGCCTTTGCTCAGAAGTCCAAAGGGGTTCCCCGGGTTCCTGTGCTGCATTCCTGCCTGTTTGTCATGATAAAGATGAAAAAGACCTGGAGGAGACAAAACAGATGCACAATGGTGCTCCTGCGTCTGTTTTCCACTCTGAGAGAAACCTTTTCTCAATTACCACTCGCAGTGGGAGCCCTCTGTCAGCCAGGGCTTATTGCCACCCTGTGCCATTCATCTTAAATTAAATGGCTTAATCAATGCCAAGACAGAGTGGAACAACATGGCAGTACAGTAAGTAATTACCCTTCTCCCATAGAGAACAACACAACACAAGCCTCTGCCAGCTAACTCTGTGCAGAACCCCACACCTGTGTGCACACTCGTAAATACAACTGTACTGTTAAGTGCAACCTCTGGGATTCTACTGCTCTGCCAGTGAGTAAACAATGCCACATTTTATTTTGGACATTATGCATGAAAATCTATTACTACAGATTACAAAATGTAAGGGAAAATGTAACTAGCAGCTAGAGTTGTCAAAAGTACTGACTTTTGACAACTCTACTACCAAAGCAATATCACCTCAGTCATTTCCTGCCGGTATTGAGGATCGATACCGCAACCTTCGGGTTACCAGTCTGACTCTCTAACCATTAGGCCACGACTATACTAATAAACAACTTTTTAATCTCACCAAATTTTTGGATTACAAATACAGTAAAAACAGTAATATTGCTATATACAAAATAGAGTGATACAAATTGTAAACAGTCTCTCAGCCAATCAGATTCAAAGACCAGAACTAACTGTTGTATGTTTTTATATTTATCCTTTTTTTGAAAATGAGGGTGAGCAAATTATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66091 True 2954 TUCP 0.42 2 13140378 13143608

Neighbor

gene id symbol gene type direction distance location
CI01000009_12854692_12859028 NA coding upstream 279347 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 486521 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 635484 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 704487 12432538 ~ 12436017 (+)
CI01000009_12387605_12388405 LRRC3 coding upstream 749713 12385222 ~ 12390665 (+)
CI01000009_13194613_13197758 NA coding downstream 50829 13194437 ~ 13199701 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 248698 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 405395 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 552917 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 608816 13752424 ~ 13753823 (+)
G58023 NA non-coding upstream 15486 13123177 ~ 13124892 (+)
G58004 NA non-coding upstream 78798 13041813 ~ 13061580 (+)
G58005 NA non-coding upstream 93203 13040326 ~ 13047175 (+)
G57739 NA non-coding upstream 214136 12923993 ~ 12926242 (+)
G57756 NA non-coding upstream 545633 12528533 ~ 12594745 (+)
G58088 NA non-coding downstream 81232 13224840 ~ 13225681 (+)
G58103 NA non-coding downstream 102733 13246341 ~ 13248989 (+)
G58118 NA non-coding downstream 125798 13269406 ~ 13269639 (+)
G58153 NA non-coding downstream 192027 13335635 ~ 13335862 (+)
G58155 NA non-coding downstream 200572 13344180 ~ 13344479 (+)
G57701 NA other upstream 117240 13006643 ~ 13023138 (+)
G57691 NA other upstream 221913 12906444 ~ 12918465 (+)
G57682 NA other upstream 248039 12825469 ~ 12892339 (+)
G57811 NA other upstream 1205127 11933942 ~ 11935251 (+)
G58382 NA other downstream 889951 14039757 ~ 14039901 (+)
G58455 NA other downstream 1103087 14246695 ~ 14258526 (+)
G58558 NA other downstream 1353328 14496936 ~ 14501514 (+)
G58649 NA other downstream 1506116 14649724 ~ 14652022 (+)
G58711 NA other downstream 1623051 14766659 ~ 14773773 (+)

Expression


Co-expression Network