G30412


Basic Information

Item Value
gene id G30412
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 63509227 ~ 63509431 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40808
gaaaacatacaaaataatgcaataacaTTGTAAAATTATAATCAATACTTACATGGACGTCCAAATGTATACATGCATGTCTTATTCTCTGTAAATAGGTAAATATTGCATAATAACTATCATGTATAGTTGTCTTACCCACCTGCCCACTAGTTAATTGCTTGTTGGTTTAGCCGGAGGTGGGCTAAAAGTATTTAAGGGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40808 True 205 lncRNA 0.41 1 63509227 63509431

Neighbor

gene id symbol gene type direction distance location
sgcb sgcb,LOC107597442,LOC107665396,LOC107718388,LOC107601954,LOC107683993,LOC107755229 coding downstream 144816 63357911 ~ 63364411 (-)
lrrc66 NA coding downstream 152938 63335850 ~ 63356289 (-)
LOC103038514 LOC108414611 coding downstream 389731 63114090 ~ 63119496 (-)
trappc8 trappc8 coding downstream 443995 63014238 ~ 63065232 (-)
LOC103046711 LOC108414824 coding downstream 501246 62979312 ~ 63007981 (-)
lnx1 lnx1,LOC107683953,LOC107665364 coding upstream 314441 63823872 ~ 63907665 (-)
kdr kdr coding upstream 826282 64335713 ~ 64370564 (-)
clock clock,clocka coding upstream 917673 64427104 ~ 64500676 (-)
nmu nmu coding upstream 997528 64506959 ~ 64526668 (-)
cep135 cep135 coding upstream 1096940 64606371 ~ 64626394 (-)
G30408 NA non-coding downstream 40476 63466320 ~ 63468751 (-)
G30410 NA non-coding downstream 60655 63447890 ~ 63448572 (-)
G30354 ociad2 non-coding downstream 196172 63307994 ~ 63313055 (-)
G30348 NA non-coding downstream 213504 63292019 ~ 63295723 (-)
G30341 NA non-coding downstream 351573 63154931 ~ 63157654 (-)
G30409 NA non-coding upstream 18080 63527511 ~ 63550219 (-)
G30421 NA non-coding upstream 104335 63613766 ~ 63614344 (-)
G30454 NA non-coding upstream 255394 63764825 ~ 63774134 (-)
G30459 NA non-coding upstream 373074 63882505 ~ 63965793 (-)
G30460 NA non-coding upstream 374929 63884360 ~ 63885522 (-)
usp46 usp46 other downstream 24206 63433792 ~ 63485021 (-)
G30376 NA other downstream 174381 63330044 ~ 63334846 (-)
fryl fryl,LOC107683942,LOC107665346 other downstream 221119 63136951 ~ 63288108 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other downstream 1618498 61831841 ~ 61890729 (-)
LOC103029720 jag2,jag2b,LOC107718403,LOC107755239 other downstream 2144349 61292876 ~ 61364878 (-)
scfd2 scfd2 other upstream 18850 63528281 ~ 63763673 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other upstream 1265253 64774684 ~ 64799176 (-)
trnad-guc_7 NA other upstream 1583647 65093078 ~ 65093149 (-)
trnad-guc_8 NA other upstream 1588171 65097602 ~ 65097673 (-)
LOC103031958 myo6 other upstream 3353034 66862465 ~ 67044318 (-)

Expression


Co-expression Network