G30477


Basic Information

Item Value
gene id G30477
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64052561 ~ 64053252 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40902
CtgtcagggttgacccaggcagagagacgaggaggcggacgtaatcAAAGGTAAGGTgagaattttaataaacaaagagacaagtaaacacgtaacaacaaaataactaaacaaacgagggaggctagagaacataaaactaaacaaacaagaggtactagtgataaacaagaaacaaacgctggaaaaataaactaggaataaacaagagagagagactaatgataaataaacaaggaggctataaaactagacaggatgaacttaaacagggcaagggaaaaaactagggatatatatacaagaaaataaaacaagaaactaaactagacagaggATGAATACACTAAACAGGGAAATGGAGTAAACTATGGaaactagaaacaaacagagataaacactaaacaaggaCCTAGGGCAATGACTAATGAAACACTGAGAggctaagaaacacagagagagacagagaaacgcagagagacagacaacgggggacagtgcaaagaccgacagaggacaagtaacagaggaagtctatataactaaacaggaaacacactgggagtggaaacacctggggaagggtggagctacaaatgagacatgaggtaatggaaaatcacaggcagaacacaggggcacgggtcacgtgggacaacacaggcacgaggacagacaggaaacagggccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40902 True 692 lncRNA 0.41 1 64052561 64053252

Neighbor

gene id symbol gene type direction distance location
lnx1 lnx1,LOC107683953,LOC107665364 coding downstream 144896 63823872 ~ 63907665 (-)
sgcb sgcb,LOC107597442,LOC107665396,LOC107718388,LOC107601954,LOC107683993,LOC107755229 coding downstream 688150 63357911 ~ 63364411 (-)
lrrc66 NA coding downstream 696272 63335850 ~ 63356289 (-)
LOC103038514 LOC108414611 coding downstream 933065 63114090 ~ 63119496 (-)
trappc8 trappc8 coding downstream 987329 63014238 ~ 63065232 (-)
kdr kdr coding upstream 282461 64335713 ~ 64370564 (-)
clock clock,clocka coding upstream 373852 64427104 ~ 64500676 (-)
nmu nmu coding upstream 453707 64506959 ~ 64526668 (-)
cep135 cep135 coding upstream 553119 64606371 ~ 64626394 (-)
aasdh NA coding upstream 620263 64673515 ~ 64694914 (-)
G30474 NA non-coding downstream 73198 63979064 ~ 63979363 (-)
G30459 NA non-coding downstream 86768 63882505 ~ 63965793 (-)
G30460 NA non-coding downstream 167039 63884360 ~ 63885522 (-)
G30454 NA non-coding downstream 278427 63764825 ~ 63774134 (-)
G30421 NA non-coding downstream 438217 63613766 ~ 63614344 (-)
G30489 NA non-coding upstream 58474 64111726 ~ 64114507 (-)
G30502 NA non-coding upstream 87800 64141052 ~ 64144287 (-)
G30554 NA non-coding upstream 213158 64266410 ~ 64269654 (-)
G30581 NA non-coding upstream 410987 64464239 ~ 64465591 (-)
G30597 NA non-coding upstream 474533 64527785 ~ 64528040 (-)
scfd2 scfd2 other downstream 288888 63528281 ~ 63763673 (-)
usp46 usp46 other downstream 567540 63433792 ~ 63485021 (-)
G30376 NA other downstream 717715 63330044 ~ 63334846 (-)
fryl fryl,LOC107683942,LOC107665346 other downstream 764453 63136951 ~ 63288108 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other downstream 2161832 61831841 ~ 61890729 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other upstream 721432 64774684 ~ 64799176 (-)
trnad-guc_7 NA other upstream 1039826 65093078 ~ 65093149 (-)
trnad-guc_8 NA other upstream 1044350 65097602 ~ 65097673 (-)
LOC103031958 myo6 other upstream 2809213 66862465 ~ 67044318 (-)
G31424 NA other upstream 3370620 67423872 ~ 67432424 (-)

Expression


Co-expression Network