G30617 (cep135)


Basic Information

Item Value
gene id G30617
gene name cep135
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64615427 ~ 64622338 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41083
CTTACCTTAACTTGTAGTTGGTCCTGGAGCAATACCATGCTTTCGGTCTTCTGGTCCACTATTTCCTGCAGGGCGTCCTTCTCATGATCCAGTGATGCTATGGCACTGTGAAGCGCTGCTACCTCATCGTTCTGAGAGGAGCCATGTCTACTCAGTTCAGTGATTTTCTCCTCCAGCTTGTCGATTTGTTGATGAGCCACCTGTATTTCATTGGTCTTGACAGACAATCTGTGCTGAATTTCAGCGAGAGATTTTTCCATTTGCTCCTGCAGCagcCTCAGTGCACTGTTCTCTGCCCTTTGCTGCACAGTCTCCTCTGCATTTTGTAGGAGAGCTGCTGAGCGGGCCTTCAGCTCCTCCTCAAAAGTCACACGGCTTTCTTTCAACACAGCCACCTGGGTGCGCAGGTCTGCCCGCTCTCTTTCCAGCGTTTGTACTGTGTTCTCTAGATCCAGTATTCTCATCTCCTCCTGCTCTCTGTCTGTCAGAGCTGAGGTCTGAGCCACCTTAAGCCTCTCACGAAGAGCATCTCTTTCTGCAGTCACTTTGTGGAGTTCAGCATCTGtctgctctctctcctctctccctctctgctgTCGCTCCGGAGAAAACATCAGTTCCCTACGAACACCCTTCAGCTCCTCCTGGgcCTGTTGATACTGTGCACTGAGTTGGTCTTTCTCAGCGGTTAGTAGTTTGACTTTAGTTTGGATGTCCTCCATGTGTTTCTCAAAGCCCAGAAGCATGGCTTGCAGCTCATCTCTTTCCCTGACAGTACGTGACAGTTCAGTGTCCGAACTGTCTCCTCTGGTTTGAAAACTCCCTCTTCCTCTGGGACTCCTGCCCCTGGACGGACTTGGAATGGGACTTCTATCTGACCCCCCTCTTGTCTTGCGGTATCTCTCTGCCTCCTGTCTGTAGTGGTCTCTTTCATCCTCCAAACTCTTCACAAAAGCATCTAGTCGAGATGGGGAGCGCTCTTTGCCGCACATTCCATGTCGAACGCGCATCCGCTCCAACTCCAGAATCATTTCTTTATCAGCTTGTGTCATTTTCTCTACTTTGTCTTGAAGTctcctcttttcctcctccAGGAAATTCAACAGTCCCTCCATTTTCTCGTTCTGCTCCTGCACCTCTGCCAGCTGATCCCTCACACGGTCCTTCTCGTGATCCTCTTCTGCCATCTCCCTTCTTAATTTAGAGATAACCTCCTCCAGGTCTTCCATTTGCCTGTGTAGCCGCTGGATCTCTTTCTTGGCCTCTTGGAGCTCCATGTCAGCCGTCTCCAGGACCTTCTCCTTGTCTTTCTCTAACTGCTGCGCTAGCTGGTCTATTTGAGTGAGTTCGTGACACAGCTCCTGGTTTCTGGCGCTGAGGTCAGCTACCTCACTTGAAACAGTATTCTTCCTCTGCTGCAGCCCCTCCACCTTCTGTTCCAGAGCTCTATTAGTCTCCTGCAGGTACTCAATCTGACAGAACAGGTTCCAGTGAGTAAGACATTAGGATGCGGTGAgaatca

Function

symbol description
cep135 Predicted to act upstream of or within centriole replication and centriole-centriole cohesion. Predicted to be located in centriole. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 8. Orthologous to human CEP135 (centrosomal protein 135).

NR:

description
PREDICTED: centrosomal protein of 135 kDa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41083 True 1522 lncRNA 0.37 10 64615427 64622338

Neighbor

gene id symbol gene type direction distance location
chst14 chst14,LOC107665414 coding upstream 12789 64591657 ~ 64602638 (+)
exoc1 exoc1,LOC107683916,LOC107555758 coding upstream 25809 64572370 ~ 64589618 (+)
LOC103022915 NA coding upstream 196984 64412269 ~ 64418443 (+)
tmem165 tmem165,LOC107665411,LOC107755243,LOC107601909,LOC107573988,LOC107683960 coding upstream 203726 64399672 ~ 64411701 (+)
srd5a3 NA coding upstream 217798 64394209 ~ 64397629 (+)
kiaa1211 kiaa1211 coding downstream 6835 64629173 ~ 64673511 (+)
LOC103038194 NA coding downstream 72624 64694962 ~ 64702540 (+)
LOC103037884 paics,LOC108415209,LOC107555752,LOC107556158,LOC108257759,LOC107721365,LOC107683924,LOC107665310,LOC107737306 coding downstream 89835 64712173 ~ 64728301 (+)
LOC103042444 NA coding downstream 109321 64731659 ~ 64742240 (+)
LOC103042125 NA coding downstream 120316 64742654 ~ 64749709 (+)
G30615 cep135 non-coding upstream 1319 64612960 ~ 64614108 (+)
G30589 NA non-coding upstream 69305 64544303 ~ 64546122 (+)
G30588 LOC107659282 non-coding upstream 72006 64542115 ~ 64543421 (+)
G30587 NA non-coding upstream 85264 64529930 ~ 64530163 (+)
G30543 NA non-coding upstream 158995 64454774 ~ 64456432 (+)
G30640 ppat,LOC106560282,LOC107683925 non-coding downstream 86985 64709323 ~ 64719038 (+)
G30646 NA non-coding downstream 98617 64720955 ~ 64832837 (+)
G30644 NA non-coding downstream 107726 64730064 ~ 64822659 (+)
G30652 NA non-coding downstream 129895 64752233 ~ 64774978 (+)
G30653 NA non-coding downstream 131188 64753526 ~ 64755851 (+)
kit kit other upstream 345732 64231244 ~ 64269695 (+)
G30362 NA other upstream 1269734 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1684294 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 1762139 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2679344 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 400081 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 455442 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 476164 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 476953 65099291 ~ 65099362 (+)
G31000 NA other downstream 1206443 65828781 ~ 65837365 (+)

Expression


Co-expression Network