G30652


Basic Information

Item Value
gene id G30652
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64752233 ~ 64774978 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41145
TGAATATTGAATGACTGACTGAATTTATTGCAaagatacataaaataaaaaaagtgattttgattATTATGCAAGCATTATATTCTACATGTGTGCCAAAGGTCACATAATAAACAATGGGCTAAACCCTTCTAATGCTCATGTGGCTGAATCCAATCAAATACTCACATCAGTGTTCCAACATCTAGTGTGAAGCCTCCACAGAAGAATAGGGACTATTACTGaagtaaagtgaaataaactctttattaaaatcaatataaaatgataataattgtTGAATGAGCAGATGCTTCAATTgctaataaactttttttatatacagtataatatacaaACTCATAACAAATCATTTGccatttttgtatgttttatccAATAGTTTGAAAACAGTTTGAACTATATTAATATACACCAATTATCaatgtacaatatattgtcatttttgtgttttatattgtaaaataataaaataaaacaataattaaaattaaaattaagtatttttttttattattaaaattaagtattttattagtgtgtgttagcGTGGAACAGCACACAGCTCGTATGGTTTAGGGCTGTGTGTGGCTCCTAATTTGAACTCCAGGCTGGGCTCCACACCCTCTGGTGGTTTGAAAGTGAAGCGCTGAAGCAGAGAACTAAAGAACAGGAACAGTTCCATTCGAGCCAGCTGCTCCACACCCTCTGGTGGTTTGAAAGTGAAGCGCTGAAGCAGAGAACTAAAGAACAGGAACAGTTCCATACGAGCCAGCTGCTCCCCAAGACACACTCTCTTACCTGGGGGAAAAAACATAAtcaaaaaaagctgtaaaaactGATGAAATACAGAGCAATGCATTTGCCCCTGAATGTTTGACCTGATGTGTACAGATTAAGGCCATGGACCactacaaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41145 True 920 lncRNA 0.37 2 64752233 64774978

Neighbor

gene id symbol gene type direction distance location
LOC103042125 NA coding upstream 2524 64742654 ~ 64749709 (+)
LOC103042444 NA coding upstream 9993 64731659 ~ 64742240 (+)
LOC103037884 paics,LOC108415209,LOC107555752,LOC107556158,LOC108257759,LOC107721365,LOC107683924,LOC107665310,LOC107737306 coding upstream 23932 64712173 ~ 64728301 (+)
LOC103038194 NA coding upstream 49693 64694962 ~ 64702540 (+)
kiaa1211 kiaa1211 coding upstream 78722 64629173 ~ 64673511 (+)
LOC103041822 NA coding downstream 28246 64803224 ~ 64810333 (+)
LOC111190912 NA coding downstream 51717 64826695 ~ 64834077 (+)
LOC103041527 LOC103041527 coding downstream 73670 64848648 ~ 64856825 (+)
LOC103036008 LOC103036008,LOC108415307 coding downstream 84352 64859330 ~ 64868413 (+)
LOC103035382 LOC108415267 coding downstream 94873 64869851 ~ 64876715 (+)
G30640 ppat,LOC106560282,LOC107683925 non-coding upstream 33195 64709323 ~ 64719038 (+)
G30617 cep135 non-coding upstream 129895 64615427 ~ 64622338 (+)
G30615 cep135 non-coding upstream 138125 64612960 ~ 64614108 (+)
G30589 NA non-coding upstream 206111 64544303 ~ 64546122 (+)
G30588 LOC107659282 non-coding upstream 208812 64542115 ~ 64543421 (+)
G30664 NA non-coding downstream 14143 64789121 ~ 64791799 (+)
G30643 NA non-coding downstream 36401 64811379 ~ 64824149 (+)
G30683 NA non-coding downstream 117420 64892398 ~ 64909454 (+)
LOC111190945 NA non-coding downstream 189334 64964312 ~ 64982401 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding downstream 209500 64984478 ~ 64987306 (+)
kit kit other upstream 482538 64231244 ~ 64269695 (+)
G30362 NA other upstream 1406540 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1821100 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 1898945 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2816150 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 247441 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 302802 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 323524 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 324313 65099291 ~ 65099362 (+)
G31000 NA other downstream 1053803 65828781 ~ 65837365 (+)

Expression


Co-expression Network