G30726


Basic Information

Item Value
gene id G30726
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65076472 ~ 65080951 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41246
AAGAACTGCTGCTCCAGGAAAGGACTGAGtttacacagccaattacccaactcactcattaggacttcccctatgCCGATACATCAACTGAGGAGCATCACAGagctctcggaggaaagcgcatcgactcggttctgatagagcagctcacagacgccttgtactgtggacatcacccttcggagtgatgaggggaaagagcttcatctacccaccaagagagagcaagaccaattgtgctctcccaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41246 True 250 lncRNA 0.41 2 65076472 65080951

Neighbor

gene id symbol gene type direction distance location
trnad-guc_6 NA coding upstream 1285 65075116 ~ 65075187 (+)
trnad-guc_5 NA coding upstream 1830 65074571 ~ 65074642 (+)
trnad-guc_4 NA coding upstream 2800 65073601 ~ 65073672 (+)
mmachc mmachc coding upstream 9074 65061824 ~ 65067398 (+)
LOC103034427 NA coding upstream 142004 64926535 ~ 64934468 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding downstream 26559 65107510 ~ 65146627 (+)
LOC103031359 NA coding downstream 102406 65183357 ~ 65211505 (+)
echdc2 echdc2 coding downstream 131742 65212693 ~ 65224500 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding downstream 165580 65246531 ~ 65249310 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding downstream 166384 65247335 ~ 65454308 (+)
G30722 LOC108415433 non-coding upstream 17022 65057519 ~ 65059450 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding upstream 89166 64984478 ~ 64987306 (+)
LOC111190945 NA non-coding upstream 94071 64964312 ~ 64982401 (+)
G30683 NA non-coding upstream 167018 64892398 ~ 64909454 (+)
G30643 NA non-coding upstream 252323 64811379 ~ 64824149 (+)
G30763 NA non-coding downstream 289457 65370408 ~ 65371798 (+)
G30767 NA non-coding downstream 322571 65403522 ~ 65441108 (+)
G30771 NA non-coding downstream 349283 65430234 ~ 65432399 (+)
G30772 NA non-coding downstream 350508 65431459 ~ 65433073 (+)
G30774 NA non-coding downstream 365403 65446354 ~ 65446930 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 29494 65022419 ~ 65046978 (+)
kit kit other upstream 806777 64231244 ~ 64269695 (+)
G30362 NA other upstream 1730779 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 2145339 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 2223184 62821743 ~ 62853288 (+)
trnad-guc_9 NA other downstream 17551 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 18340 65099291 ~ 65099362 (+)
G31000 NA other downstream 747830 65828781 ~ 65837365 (+)
G31355 NA other downstream 2133354 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2402384 67483335 ~ 67506898 (+)

Expression


Co-expression Network