LOC103031672


Basic Information

Item Value
gene id LOC103031672
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65077780 ~ 65086780 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41249
CAGTACCCCAAAATGTACAGTGATGACCCGGCGGCCCTATATCACCTGTATCAGAGAGGCTCAACCAAAACACTAATGAAATCCTACCTCTGTTCCTGTTCTTTTTGACTGCTGGAGGCATACACCAATCCAGTGAGTTCAGTCAGACACAAATATTATTAGATCATCATTAGTGGACAGCCATCTTTATGGTttatatgtgcatgtgtgtctcTTAGCGTCTGGCTAGTGGCTTGGGGGCAATTTGGATTGTCAGCAGATTGGTGTACGCACACGGATACTCATCTGGAGATCCTGCTAAGAGGAAGCGAGGGGCTTTTGGGGACTTGGCTTTGCTGGGCCTGGTCTTCTGTACTGTGGACAGTGGCAGAACCATGCTGGGGTGGGGCTGTAGGCCCAAGTGGTCCAGAGGGatttttaaaactctttaaatgaacaca
>XM_022678446.1
ATGGCGTACCCCAAAATGTACAGTGATGACCGCGGCCCTATATCACCTGTATCAGAGAGGCTCAACCAAAACACTAATGAAATCCTACCTCTGTTCCTGTTCTTTTTGACTGCTGGAGGCATACACAATCCACGTCTGGCTAGTGGCTTGGGGGCAATTTGGATTGTCAGCAGATTGGTGTACGCACACGGATACTCATCTGGAGATCCTGCTAAGAGGAAGCGAGGGGCTTTTGGGGACTTGGCTTTGCTGGGCCTGGTCTTCTGTACTGTGGACAGTGGCAGAACCATGCTGGGGTGGGGCTGTAGGCCCAAGTGGTCCAGAGGGatttttaaaactctttaaatgaacacaagcaaataatacattttaacttttattgtgaattatttctgtaatgtttaataaagtaaaaaaaaatcattactcATTAAGATTCACCACTTAatttataaaagaaatacatacaATGCAAATTCCTTAAATTAAGCAAGAGAtttgcttgaaaaaaaaaggtgcagcAGTTTTACAGTCATATCTTGTTTACtgaaaacatttgactggttcTACTTTACCCGGTGCTGCACAGACTAAACAGTGCCTGGCTTGGGACGGTGCAAGTTCTGCAGTTGCTTCTCACAGGCTGCACAAGGTGAGAGATGCCCTGATGAACACAGATGCTTACTTCTCATTGGCTAAAACCTGCATTCACTATGAATGTTAATAATTAATGCCATCTAGtagcaaaacatttttattttatgtcataattagaatttttttattgtgatatttatataaattctcTAATGGTCTATGTGTTCATTCTCATTTCACTTATGTCAAttgcttttaaaatgtatatcttaacttttttaacagCTCTATATTacttttcactttaatttcttTGATGATAAATTGATTACATTTGAAAACATTGTttgaaaaacttttaaaatatgtaattttaatgtttaatattattaatattattatta

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005635 nuclear envelope cellular_component
GO:0004602 glutathione peroxidase activity molecular_function
GO:0004364 glutathione transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41249 False 440 lncRNA 0.39 3 65083989 65086133
XM_022678446.1 True 1001 mRNA 0.36 7 65077780 65086780

Neighbor

gene id symbol gene type direction distance location
trnad-guc_6 NA coding upstream 2593 65075116 ~ 65075187 (+)
trnad-guc_5 NA coding upstream 3138 65074571 ~ 65074642 (+)
trnad-guc_4 NA coding upstream 4108 65073601 ~ 65073672 (+)
mmachc mmachc coding upstream 10382 65061824 ~ 65067398 (+)
LOC103034427 NA coding upstream 143312 64926535 ~ 64934468 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding downstream 20730 65107510 ~ 65146627 (+)
LOC103031359 NA coding downstream 96577 65183357 ~ 65211505 (+)
echdc2 echdc2 coding downstream 125913 65212693 ~ 65224500 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding downstream 159751 65246531 ~ 65249310 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding downstream 160555 65247335 ~ 65454308 (+)
G30722 LOC108415433 non-coding upstream 18330 65057519 ~ 65059450 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding upstream 90474 64984478 ~ 64987306 (+)
LOC111190945 NA non-coding upstream 95379 64964312 ~ 64982401 (+)
G30683 NA non-coding upstream 168326 64892398 ~ 64909454 (+)
G30643 NA non-coding upstream 253631 64811379 ~ 64824149 (+)
G30763 NA non-coding downstream 283628 65370408 ~ 65371798 (+)
G30767 NA non-coding downstream 316742 65403522 ~ 65441108 (+)
G30771 NA non-coding downstream 343454 65430234 ~ 65432399 (+)
G30772 NA non-coding downstream 344679 65431459 ~ 65433073 (+)
G30774 NA non-coding downstream 359574 65446354 ~ 65446930 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 30802 65022419 ~ 65046978 (+)
kit kit other upstream 808085 64231244 ~ 64269695 (+)
G30362 NA other upstream 1732087 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 2146647 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 2224492 62821743 ~ 62853288 (+)
trnad-guc_9 NA other downstream 11722 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 12511 65099291 ~ 65099362 (+)
G31000 NA other downstream 742001 65828781 ~ 65837365 (+)
G31355 NA other downstream 2127525 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2396555 67483335 ~ 67506898 (+)

Expression


Co-expression Network