G30763


Basic Information

Item Value
gene id G30763
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65370408 ~ 65371798 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41296
tgaaatGGAATGTTATTTGGCATGAGCTGGTAACTGATTCCACCTCCTGTCAGCAGAACACCTCAGATTTCAGAGGTGTGTACAGGGTGCCTGTGTGTTTGGAGCGTATACGTCTACATGAGTTTGCGTGTGCGACGTGCGTCCGTCTGTGCTCACGTACAGCCTGCTGCCAGctccagggttgccagatttgcTGACTTTGCAccgttttcttttcttttcatgtaCGCACGAGTTGGAGGCTTCCACAATTAACACATACATTGTGCGAAGGTGCACAGTACATTTATAAACAGGGCTAAACAAATCAAAGGCATAACTATTATAAATAACCACTGATAAATAACAGATAGGGTGGATAGGTGCCGTTCtgtaatatgagtttttttaaattaactctTTAACACAAAATACAAGGCAAACATAAAACATGAAGTATATTTACAGACCAATAACACGTATCAAAGCACACTGGGCCCTTTGGCACAGTCTGTTTCCAGTCCTTTGTAGGGAAATAAGAAATAGTATATAAAGTGAAGGGGTGTGAATGGTATGAAAAGAAAACTGATtgggaataaaataaagaaaagagcgGTGTAGGAAAGGATAGAAGAAGTATAGAGCAATTGATCCCAGTCTGACTTGGGATAATGTCTTTTAAGAAATGACATTTTCCTGTCGACTGCTGATGTCCCCAAGCTTTTGACTGGCCAGGGCTTGACCGTTGCCCCAAAGTGTGTGATGTTCTTCTTCTAGATGTTCTGTCCTTGTTAGGGTGAAAGCACGGTTCTAAAATAGCTGGCGTTTGTGCTGAATATACAGAAGTGCTTCtcaaccctggtcctggagtACTGTTATTGTCCTCAATGTGTTGCTGCTCTAGTTAAACACCTGATCCTTTTTATCCAATCTGGGctcagtttcccaaaagcatcttggctttatgatcattttaactggtaaagagagagagagcattcaagctcctgctgaggtaaatttgagtgttttttagagcagggaaaacagcaaaatgtgCAGGACAGTCTGCTGCTCCAGGACCAGAGCTGGAACCTACTGATATACAGCTAAAGTAAAGTAGCGGTAAAGTAGAGGGAGTTTGATGAGACCTTTGAGAGAGACGTTTAGAAGGAGTCAAAGAGCAAGTCTTAGTCGATGGGTCGGATCATCATGCGGACAGACTTGAGTGAATAAAAGCCGCCTCCGTAATCAGCCCAGAAGATCCCATCCTGGAACTTGCTGCGGTACACGCCCCCTGTGTACCAAACGCCATTCAGGTTGGTCTGCCCACATGCGTTGTACCACCAGCCACCTTTGTGGAAGTGAGCGCAGTTACCTGTAGTAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41296 True 1370 lncRNA 0.46 2 65370408 65371798

Neighbor

gene id symbol gene type direction distance location
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 121098 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 145908 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 158903 65183357 ~ 65211505 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding upstream 223781 65107510 ~ 65146627 (+)
trnad-guc_6 NA coding upstream 295221 65075116 ~ 65075187 (+)
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding downstream 84939 65456737 ~ 65490821 (+)
LOC111191945 NA coding downstream 477329 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 483136 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 497550 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 519132 65890930 ~ 65902416 (+)
G30718 NA non-coding upstream 211144 65050824 ~ 65159264 (+)
G30726 NA non-coding upstream 289457 65076472 ~ 65080951 (+)
G30722 LOC108415433 non-coding upstream 310958 65057519 ~ 65059450 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding upstream 383102 64984478 ~ 64987306 (+)
LOC111190945 NA non-coding upstream 388007 64964312 ~ 64982401 (+)
G30767 NA non-coding downstream 31724 65403522 ~ 65441108 (+)
G30771 NA non-coding downstream 58436 65430234 ~ 65432399 (+)
G30772 NA non-coding downstream 59661 65431459 ~ 65433073 (+)
G30774 NA non-coding downstream 74556 65446354 ~ 65446930 (+)
G30775 NA non-coding downstream 95675 65467473 ~ 65468744 (+)
trnad-guc_10 NA other upstream 271046 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 271835 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 283628 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 323430 65022419 ~ 65046978 (+)
kit kit other upstream 1100713 64231244 ~ 64269695 (+)
G31000 NA other downstream 456983 65828781 ~ 65837365 (+)
G31355 NA other downstream 1842507 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2111537 67483335 ~ 67506898 (+)
G31407 NA other downstream 2125405 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 2319643 67691441 ~ 67844634 (+)

Expression


Co-expression Network