G30774


Basic Information

Item Value
gene id G30774
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65446354 ~ 65446930 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41311
CCCCCTCATTCCCTCGATTGTGCACCCCTCATTCCCCTGATTGTGCCCCCCTCATTCCCTCGATTGTGCACCCCTTATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTTATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTTATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCTG
>TU41312
TGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTTATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTTATTACCCTGATTGTGCACCCCTCATTACCCTGATTGTGCACCCCTCATTACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41311 False 222 lncRNA 0.32 3 65446664 65446930
TU41312 True 231 lncRNA 0.34 3 65446354 65446930

Neighbor

gene id symbol gene type direction distance location
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 197044 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 221854 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 234849 65183357 ~ 65211505 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding upstream 299727 65107510 ~ 65146627 (+)
trnad-guc_6 NA coding upstream 371167 65075116 ~ 65075187 (+)
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding downstream 9807 65456737 ~ 65490821 (+)
LOC111191945 NA coding downstream 402197 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 408004 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 422418 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 444000 65890930 ~ 65902416 (+)
G30767 NA non-coding upstream 5246 65403522 ~ 65441108 (+)
G30772 NA non-coding upstream 13281 65431459 ~ 65433073 (+)
G30771 NA non-coding upstream 13955 65430234 ~ 65432399 (+)
G30763 NA non-coding upstream 74556 65370408 ~ 65371798 (+)
G30718 NA non-coding upstream 287090 65050824 ~ 65159264 (+)
G30775 NA non-coding downstream 20543 65467473 ~ 65468744 (+)
G30779 NA non-coding downstream 48591 65495521 ~ 65496339 (+)
G30780 NA non-coding downstream 50164 65497094 ~ 65500395 (+)
G30959 NA non-coding downstream 116724 65563654 ~ 65563914 (+)
G30968 NA non-coding downstream 149457 65596387 ~ 65597484 (+)
trnad-guc_10 NA other upstream 346992 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 347781 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 359574 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 399376 65022419 ~ 65046978 (+)
kit kit other upstream 1176659 64231244 ~ 64269695 (+)
G31000 NA other downstream 381851 65828781 ~ 65837365 (+)
G31355 NA other downstream 1767375 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2036405 67483335 ~ 67506898 (+)
G31407 NA other downstream 2050273 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 2244511 67691441 ~ 67844634 (+)

Expression


Co-expression Network