G30775


Basic Information

Item Value
gene id G30775
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65467473 ~ 65468744 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41313
tgacaggtaGCGCCTCAGTACAGCAGAGCCGCTCAACGCAGCTCACAGCCCCCTCCGCTGCTGCTCTCGAGAaggttgaaaagaagatgaagaagttTCAGCTTGCAGCTATGGAGAGTTCACCACGAAAAGAACGAAGTCAAAGAATACAAAGATCTGTCCATATTCTGAAGTCACCACTTGAAGAttttatgcagaattatttggattatgaataggaaccacattatttgcaacagcttttattatttatacaaacaagTTGAACATGATATGATGTGCCAGAATATAGGGAGGCTgcctaaaacatacaaaaaaaaatacagaacacatgtaaacaactaaagaaaaacagaacatggcacaaataaatcaaataaacacagcacagactgcatgaaattggatttctttatttgttctttaaaagtttggagaaaggaaacctgtGGAATACAAAAGAAACTTGAAAAATTACTGCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41313 True 485 lncRNA 0.29 2 65467473 65468744

Neighbor

gene id symbol gene type direction distance location
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 13165 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 218163 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 242973 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 255968 65183357 ~ 65211505 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding upstream 320846 65107510 ~ 65146627 (+)
LOC111191945 NA coding downstream 380383 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 386190 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 400604 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 422186 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 439564 65908308 ~ 65931231 (+)
G30774 NA non-coding upstream 20543 65446354 ~ 65446930 (+)
G30767 NA non-coding upstream 26365 65403522 ~ 65441108 (+)
G30772 NA non-coding upstream 34400 65431459 ~ 65433073 (+)
G30771 NA non-coding upstream 35074 65430234 ~ 65432399 (+)
G30763 NA non-coding upstream 95675 65370408 ~ 65371798 (+)
G30779 NA non-coding downstream 26777 65495521 ~ 65496339 (+)
G30780 NA non-coding downstream 28350 65497094 ~ 65500395 (+)
G30959 NA non-coding downstream 94910 65563654 ~ 65563914 (+)
G30968 NA non-coding downstream 127643 65596387 ~ 65597484 (+)
G30986 NA non-coding downstream 208776 65677520 ~ 65682673 (+)
trnad-guc_10 NA other upstream 368111 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 368900 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 380693 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 420495 65022419 ~ 65046978 (+)
kit kit other upstream 1197778 64231244 ~ 64269695 (+)
G31000 NA other downstream 360037 65828781 ~ 65837365 (+)
G31355 NA other downstream 1745561 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2014591 67483335 ~ 67506898 (+)
G31407 NA other downstream 2028459 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 2222697 67691441 ~ 67844634 (+)

Expression


Co-expression Network