G30959


Basic Information

Item Value
gene id G30959
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65563654 ~ 65563914 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41567
ATataggaaatcagcgccaccagactgtcttttaaagccgtgagtaacgcctctgaggtccgcaaacagagagagtgtgaaagagggggtttgccacgccccgctcaagtgagaatcgcccaaccttgtccgaaaaaagcgcgctgaaaagcgcgtttgctgttgctgctacagcgtctctgaagtgaaagtaaagtaaaaaaagtaaaagagcagtctggtgtagcttgaagttcctgctagccctgctagtgtgccctT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41567 True 261 lncRNA 0.43 1 65563654 65563914

Neighbor

gene id symbol gene type direction distance location
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding upstream 72833 65456737 ~ 65490821 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 109346 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 314344 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 339154 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 352149 65183357 ~ 65211505 (+)
LOC111191945 NA coding downstream 285213 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 291020 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 305434 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 327016 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 344394 65908308 ~ 65931231 (+)
G30780 NA non-coding upstream 63259 65497094 ~ 65500395 (+)
G30779 NA non-coding upstream 67315 65495521 ~ 65496339 (+)
G30775 NA non-coding upstream 94910 65467473 ~ 65468744 (+)
G30774 NA non-coding upstream 116724 65446354 ~ 65446930 (+)
G30772 NA non-coding upstream 130581 65431459 ~ 65433073 (+)
G30968 NA non-coding downstream 32473 65596387 ~ 65597484 (+)
G30986 NA non-coding downstream 113606 65677520 ~ 65682673 (+)
G30995 NA non-coding downstream 151653 65715567 ~ 65715777 (+)
G31004 NA non-coding downstream 170566 65734480 ~ 65734709 (+)
G31009 NA non-coding downstream 269190 65833104 ~ 65835279 (+)
trnad-guc_10 NA other upstream 464292 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 465081 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 476874 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 516676 65022419 ~ 65046978 (+)
kit kit other upstream 1293959 64231244 ~ 64269695 (+)
G31000 NA other downstream 264867 65828781 ~ 65837365 (+)
G31355 NA other downstream 1650391 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1919421 67483335 ~ 67506898 (+)
G31407 NA other downstream 1933289 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 2127527 67691441 ~ 67844634 (+)

Expression


Co-expression Network