G59292


Basic Information

Item Value
gene id G59292
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13270845 ~ 13271446 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU67516
ATTCATCAGTCAACACCATTGCTGAGTATTTTCTCTTTAAAACTGCAGTGAAACAAACAGTCTCAAACCTGCGGTTTAAAATTGCTGGTGTTTCTGATGTCACAAACTACCTTGTAACCAATCACATCAACGTGCCGGCGGGCTTTAGCATATCATTAACCATTAGTGCGGTAAAACAGGAGAGTCTCAAGAAAACATCCCGGTATATTTTTCTGTTCATATAAAAAATTGTGTAGATTTACCAATATAGCGGGTGTATGATGTATATTACGATGTTATGATGAACTATACATGCCTTTCTCCACTGATGTTCTAAGGTGTTCAAAGCATTTCTAAGGATGCTGATTGTTAGAAGACAGCTGTCTGACTCGCGAACGGGAACATGGTTTGTGTAACATTAGCAACACATTATTAGCTGTTTGATAATGTAGTCAAGCAAAAGGCTATTCATATTAAATACCGCCATGTGTTCGACGTTGTAAAAAGCGATACCATCGTTCAGCGTTTACCTCAGCAGTTGACCGAGTGGATCTCTGAGCTCGTGTGAGTGAGTGGAGGTGGGGCTAATTAGTATATTCATAGATCCGTGTATAATAAATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67516 True 602 lncRNA 0.39 1 13270845 13271446

Neighbor

gene id symbol gene type direction distance location
CI01000009_13233918_13237052 ZNF385B coding downstream 33793 13233350 ~ 13237052 (-)
CI01000009_13161845_13162324 NA coding downstream 108521 13161766 ~ 13162324 (-)
CI01000009_13124087_13152851 ZNF385B coding downstream 117623 13123994 ~ 13158324 (-)
CI01000009_13068379_13105228 SESTD1 coding downstream 165617 13067450 ~ 13105228 (-)
CI01000009_12863333_13023317 NA coding downstream 247528 12862620 ~ 13023317 (-)
CI01000009_13273365_13305127 CWC22 coding upstream 1919 13273365 ~ 13305127 (-)
CI01000009_13350460_13383813 NA coding upstream 78711 13350157 ~ 13384669 (-)
CI01000009_13585375_13664189 CERKL coding upstream 313929 13583450 ~ 13664189 (-)
CI01000009_13667246_13668040 NDF1, NEUROD1 coding upstream 395007 13666453 ~ 13668597 (-)
CI01000009_13761020_13794137 PDE1A coding upstream 488664 13760110 ~ 13794188 (-)
G59274 NA non-coding downstream 45483 13207082 ~ 13225362 (-)
G59275 NA non-coding downstream 64241 13198502 ~ 13206604 (-)
G59276 NA non-coding downstream 72449 13110635 ~ 13198396 (-)
G59280 NA non-coding downstream 86357 13162876 ~ 13184488 (-)
G59363 NA non-coding upstream 55099 13326545 ~ 13327384 (-)
G59457 NA non-coding upstream 409532 13680978 ~ 13681722 (-)
G59473 NA non-coding upstream 429146 13700592 ~ 13787413 (-)
G59472 NA non-coding upstream 528552 13799998 ~ 13819996 (-)
G59097 NA other downstream 981327 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 4410282 8856310 ~ 8860563 (-)
G55814 NA other downstream 4842833 8425821 ~ 8428012 (-)
G53515 NA other downstream 7765597 5502395 ~ 5505248 (-)
G52828 NA other downstream 9039376 4217420 ~ 4231469 (-)
CI01000009_13975122_13976026 NA other upstream 703942 13975099 ~ 13978614 (-)
G59490 NA other upstream 762118 14033564 ~ 14037873 (-)
G59811 NA other upstream 1590951 14862397 ~ 14887464 (-)
G59941 NA other upstream 1860658 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 2104814 15318811 ~ 15390382 (-)

Expression


Co-expression Network