G31000


Basic Information

Item Value
gene id G31000
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65828781 ~ 65837365 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41629
TTTGGCTGTGGGactgttgttttattgaattagaataatggagaaaccgtttcattgaattagaataaatgctcgaatttttgttttctgtgaagagtgttcactgtgcagtataaagtcagggttgagtagaatttctaagttgtaaaatcaatcatgggtaagcagcgcgacctctcaaccggaatagtggctcaaattcaagcccttcgccaacaaggcttgacccaaactaaaattgctgagcagctcggcatcagccagtcttcccgTCTgtaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcgtccgaaaaacttctgctcgcgacaacaagcagctgagaaagatcgcagtcagcaaccggttcaagtccacttccgagctcaccgacttgtggaacaagcagaccggcgctgacgtctccagatcaaccacttaccgtcgtctgcgcgaactcggcttcaaatcttgcgttccagcagtaaaaccgatgctgaacaagaaacaaatggagaaacggctgaagtgggccaaagaacacggcgagtggactgctgaagactgtcagaaagtggtcttcagtgacgaatcacgcttctgcatctccttcggtgaccaaggtcctcgtgtctggtgtcgtggtggcgaaacctacaaccacgagtgcgtgaaaagatccatcaagtttccccagagcgttatggtctggggatgcatgtccgctcgaggtgtagggaaactctgcttcctcaagaagactgtcaatgctgccgtatatcaagatgttctggaaacgttcctgattccgactgttgaggaacagttcggcgaagaagacttcatatttcaacaggatcttgcaccggctcatgcggcaaagtcgaccaaagattggttcactaaaaaacagcttgaagttttggcatggccggccaactcgcctgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41629 True 965 TUCP 0.37 2 65828781 65837365

Neighbor

gene id symbol gene type direction distance location
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding upstream 337960 65456737 ~ 65490821 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 374473 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 579471 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 604281 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 617276 65183357 ~ 65211505 (+)
LOC111191945 NA coding downstream 11762 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 17569 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 31983 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 53565 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 70943 65908308 ~ 65931231 (+)
G31004 NA non-coding upstream 94072 65734480 ~ 65734709 (+)
G30995 NA non-coding upstream 113004 65715567 ~ 65715777 (+)
G30986 NA non-coding upstream 146108 65677520 ~ 65682673 (+)
G30968 NA non-coding upstream 231297 65596387 ~ 65597484 (+)
G30959 NA non-coding upstream 264867 65563654 ~ 65563914 (+)
G30997 prdx6,LOC106584278 non-coding downstream 53 65837418 ~ 65847147 (+)
G31012 NA non-coding downstream 33833 65871198 ~ 65871687 (+)
G31090 NA non-coding downstream 174817 66012182 ~ 66018251 (+)
G31091 NA non-coding downstream 227988 66065353 ~ 66066097 (+)
G31119 NA non-coding downstream 242539 66079904 ~ 66080258 (+)
trnad-guc_10 NA other upstream 729419 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 730208 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 742001 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 781803 65022419 ~ 65046978 (+)
kit kit other upstream 1559086 64231244 ~ 64269695 (+)
G31355 NA other downstream 1376940 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1645970 67483335 ~ 67506898 (+)
G31407 NA other downstream 1659838 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1854076 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 2182675 68020040 ~ 68022940 (+)

Expression


Co-expression Network