G31012


Basic Information

Item Value
gene id G31012
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65871198 ~ 65871687 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41648
gctaactcactgaataggtaaatagctaactcactgactaggtaaatagctaactcactgactaggtaaatagctaactcactgactagGTAAATAGCTAACTGACTAGCTCATTGAATAAGTAAATAGCTAATAGCGTTTGGGAGAGCGCTGGAAGCTGCAGGCGAGGTGGGCGTGGTCAGTGTCAGACGGAGGGTTCAGGCAGAGCCGTCaagctgaccaatggagattcaagagGAGCACCTCCTTCTAAGCCACACCCACACCAGTGTGTCAAAAATCCAGAAGCAAAAACCTGAAGCAGAAGCaagagagattccagaagcaaaagtctttagcggcaaaatccacaaaaacacaaaaatgaaagcaaaaactgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41648 True 380 lncRNA 0.39 2 65871198 65871687

Neighbor

gene id symbol gene type direction distance location
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding upstream 9070 65854934 ~ 65862128 (+)
LOC111191945 NA coding upstream 21436 65849127 ~ 65849762 (+)
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding upstream 380377 65456737 ~ 65490821 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 416890 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 621888 65246531 ~ 65249310 (+)
LOC103024186 LOC108415675 coding downstream 19243 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 36621 65908308 ~ 65931231 (+)
mettl13 mettl13,LOC107712871,LOC107733805 coding downstream 117845 65989532 ~ 66006461 (+)
LOC103035811 dnm3,dnm3a,LOC107712872,LOC107581471 coding downstream 135569 66007256 ~ 66068036 (+)
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding downstream 225028 66096715 ~ 66273717 (+)
G30997 prdx6,LOC106584278 non-coding upstream 24051 65837418 ~ 65847147 (+)
G31009 NA non-coding upstream 35919 65833104 ~ 65835279 (+)
G31004 NA non-coding upstream 136489 65734480 ~ 65734709 (+)
G30995 NA non-coding upstream 155421 65715567 ~ 65715777 (+)
G30986 NA non-coding upstream 188525 65677520 ~ 65682673 (+)
G31090 NA non-coding downstream 140495 66012182 ~ 66018251 (+)
G31091 NA non-coding downstream 193666 66065353 ~ 66066097 (+)
G31119 NA non-coding downstream 208217 66079904 ~ 66080258 (+)
G31123 NA non-coding downstream 403479 66275166 ~ 66275599 (+)
G31149 NA non-coding downstream 471647 66343334 ~ 66394105 (+)
G31000 NA other upstream 33833 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 771836 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 772625 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 784418 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 824220 65022419 ~ 65046978 (+)
G31355 NA other downstream 1342618 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1611648 67483335 ~ 67506898 (+)
G31407 NA other downstream 1625516 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1819754 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 2148353 68020040 ~ 68022940 (+)

Expression


Co-expression Network