G31021


Basic Information

Item Value
gene id G31021
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65728479 ~ 65728703 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41663
tagaagagctccaacactaaacatgtttaaatccagactgaaaacctacatgtttgatcaggctttcagctcagcttaaaacactgcagctccacacacttttattctgtaacggcacttttatattatgttttattcatgctttattcttattaattccttgttgttcttttacatgtttttaatttaattctctttgttttaatcatgttttaatcaatcatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41663 True 225 lncRNA 0.45 1 65728479 65728703

Neighbor

gene id symbol gene type direction distance location
jun jun coding downstream 119705 65606592 ~ 65608774 (-)
LOC103027150 LOC108415562 coding downstream 126940 65598312 ~ 65601539 (-)
LOC103027761 NA coding downstream 131020 65592679 ~ 65597459 (-)
LOC103027441 NA coding downstream 141910 65582983 ~ 65586569 (-)
LOC103029766 angptl1,LOC107658173,LOC107739855,LOC107669140,LOC107712858 coding downstream 309998 65370370 ~ 65418481 (-)
LOC103026271 prdx6,LOC107712864 coding upstream 110177 65838880 ~ 65847180 (-)
myoc myoc coding upstream 202620 65931323 ~ 65941098 (-)
vamp4 vamp4 coding upstream 218931 65947634 ~ 65965285 (-)
itpa itpa coding upstream 257822 65986525 ~ 65989450 (-)
nt5e nt5e,LOC107562347,LOC107660511,LOC107680304,LOC107554926 coding upstream 662934 66391637 ~ 66430046 (-)
G30990 NA non-coding downstream 46876 65677510 ~ 65681603 (-)
G30980 NA non-coding downstream 136425 65591823 ~ 65592054 (-)
G30942 fam20b,LOC107597857,LOC107712860,LOC107658171,LOC107669149 non-coding downstream 253814 65473137 ~ 65474665 (-)
G30919 NA non-coding downstream 274219 65281419 ~ 65454260 (-)
G30900 NA non-coding downstream 569195 65154118 ~ 65159284 (-)
G31029 NA non-coding upstream 104875 65833578 ~ 65835223 (-)
G31049 NA non-coding upstream 142361 65871064 ~ 65872082 (-)
G31051 NA non-coding upstream 146484 65875187 ~ 65875426 (-)
G31052 NA non-coding upstream 149393 65878096 ~ 65880707 (-)
G31054 NA non-coding upstream 154564 65883267 ~ 65883613 (-)
trnad-guc_8 NA other downstream 630806 65097602 ~ 65097673 (-)
trnad-guc_7 NA other downstream 635330 65093078 ~ 65093149 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other downstream 929303 64774684 ~ 64799176 (-)
scfd2 scfd2 other downstream 1964806 63528281 ~ 63763673 (-)
usp46 usp46 other downstream 2243458 63433792 ~ 63485021 (-)
LOC103031958 myo6 other upstream 1133762 66862465 ~ 67044318 (-)
G31424 NA other upstream 1695169 67423872 ~ 67432424 (-)
G31437 NA other upstream 1775046 67503749 ~ 67528337 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other upstream 2126903 67855606 ~ 67885433 (-)
LOC103046133 LOC108439589 other upstream 2203857 67932560 ~ 67940713 (-)

Expression


Co-expression Network