Gene
RNA
| Item | Value |
|---|---|
| gene id | G31054 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 65883267 ~ 65883613 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU41706 | True | 347 | lncRNA | 0.39 | 1 | 65883267 | 65883613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103026271 | prdx6,LOC107712864 | coding | downstream | 36087 | 65838880 ~ 65847180 (-) |
| jun | jun | coding | downstream | 274493 | 65606592 ~ 65608774 (-) |
| LOC103027150 | LOC108415562 | coding | downstream | 281728 | 65598312 ~ 65601539 (-) |
| LOC103027761 | NA | coding | downstream | 285808 | 65592679 ~ 65597459 (-) |
| LOC103027441 | NA | coding | downstream | 296698 | 65582983 ~ 65586569 (-) |
| myoc | myoc | coding | upstream | 47710 | 65931323 ~ 65941098 (-) |
| vamp4 | vamp4 | coding | upstream | 64021 | 65947634 ~ 65965285 (-) |
| itpa | itpa | coding | upstream | 102912 | 65986525 ~ 65989450 (-) |
| nt5e | nt5e,LOC107562347,LOC107660511,LOC107680304,LOC107554926 | coding | upstream | 508024 | 66391637 ~ 66430046 (-) |
| mei4 | NA | coding | upstream | 664377 | 66547990 ~ 66674798 (-) |
| G31052 | NA | non-coding | downstream | 2560 | 65878096 ~ 65880707 (-) |
| G31051 | NA | non-coding | downstream | 7841 | 65875187 ~ 65875426 (-) |
| G31049 | NA | non-coding | downstream | 11185 | 65871064 ~ 65872082 (-) |
| G31029 | NA | non-coding | downstream | 48044 | 65833578 ~ 65835223 (-) |
| G31021 | NA | non-coding | downstream | 154564 | 65728479 ~ 65728703 (-) |
| G31053 | NA | non-coding | upstream | 1855 | 65885468 ~ 65886167 (-) |
| G31070 | NA | non-coding | upstream | 34779 | 65918392 ~ 65923367 (-) |
| G31073 | prrc2c,LOC107697494 | non-coding | upstream | 40618 | 65924231 ~ 65924697 (-) |
| G31102 | NA | non-coding | upstream | 121280 | 66004893 ~ 66005868 (-) |
| G31108 | NA | non-coding | upstream | 140602 | 66024215 ~ 66069347 (-) |
| trnad-guc_8 | NA | other | downstream | 785594 | 65097602 ~ 65097673 (-) |
| trnad-guc_7 | NA | other | downstream | 790118 | 65093078 ~ 65093149 (-) |
| LOC103036530 | cyp2p7,cyp2j20,LOC108415355 | other | downstream | 1084091 | 64774684 ~ 64799176 (-) |
| scfd2 | scfd2 | other | downstream | 2119594 | 63528281 ~ 63763673 (-) |
| usp46 | usp46 | other | downstream | 2398246 | 63433792 ~ 63485021 (-) |
| LOC103031958 | myo6 | other | upstream | 978852 | 66862465 ~ 67044318 (-) |
| G31424 | NA | other | upstream | 1540259 | 67423872 ~ 67432424 (-) |
| G31437 | NA | other | upstream | 1620136 | 67503749 ~ 67528337 (-) |
| arpc5 | arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 | other | upstream | 1971993 | 67855606 ~ 67885433 (-) |
| LOC103046133 | LOC108439589 | other | upstream | 2048947 | 67932560 ~ 67940713 (-) |
