G31091


Basic Information

Item Value
gene id G31091
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 66065353 ~ 66066097 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41762
CCTTTACTTCTGTGTTAGTTTTTCACCCCTCCCTTTTTGACATTCCCTCTTTTCACTGCGCATTTGCTTTCTTGTTATCTTTCCCATCATCTTTGCCTTATCAACCCTCATTTTGctctttttaagtcattttacagTTTCTTTAACACCTTCTATAGTTTCTGTACTCCAGTGCACTGAACCTGACATACATCTCAGAACGGTGCTCTGCTCAAGCATTCTGTTTCTTATGCAGAAAGCAGAATATACACTATTTATgagtttttttcacattttgagacACCTATCCCAGCCCCACACAATTTACATTGTCCATTTAAATTtgctaaatgaaataaatatgcTTCTGCACACTTCAAATCTGTTAAAGGGTTCACCAGTTAACCCTTAATGCTTAATTACCTTTGTTACACCCCAAGTAATACTAATCAGTGAGGAAAGAGCCAGGAGCCACCCAGAATTCTCACCGACTCACTCACTCAGCACTTTTTACACTCTCAGTTCATTACTatttctctttcagtctctctatTTAACACACTAAATTAGATTAAATAGCCCTTgcattctctgtctctcctacAATAAACCTCTGGTATTTCCAGGTCGTTAGATTTGCTTGGTTTCATCAAactttgtttttgctttcttttccaTCGTCTTACTCTTTTCTTTCGATTGTCCAGCATTCAATGCAGATCAGGAAAAATAAAAGCCGCTCT

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase 5A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41762 True 722 lncRNA 0.53 2 66065353 66066097

Neighbor

gene id symbol gene type direction distance location
mettl13 mettl13,LOC107712871,LOC107733805 coding upstream 58892 65989532 ~ 66006461 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding upstream 134122 65908308 ~ 65931231 (+)
LOC103024186 LOC108415675 coding upstream 162937 65890930 ~ 65902416 (+)
LOC103025553 NA coding upstream 178615 65869348 ~ 65886738 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding upstream 203225 65854934 ~ 65862128 (+)
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding downstream 30618 66096715 ~ 66273717 (+)
cnr1 cnr1,LOC104936193 coding downstream 270332 66336429 ~ 66341957 (+)
LOC103022286 snx14,LOC108427503,LOC108279824 coding downstream 283254 66349351 ~ 66388214 (+)
htr1b LOC108427470 coding downstream 615025 66681122 ~ 66684322 (+)
LOC103023947 impg1,LOC107660503 coding downstream 735494 66801591 ~ 66859895 (+)
G31090 NA non-coding upstream 47102 66012182 ~ 66018251 (+)
G31012 NA non-coding upstream 193666 65871198 ~ 65871687 (+)
G30997 prdx6,LOC106584278 non-coding upstream 218206 65837418 ~ 65847147 (+)
G31009 NA non-coding upstream 230074 65833104 ~ 65835279 (+)
G31004 NA non-coding upstream 330644 65734480 ~ 65734709 (+)
G31119 NA non-coding downstream 13807 66079904 ~ 66080258 (+)
G31123 NA non-coding downstream 209069 66275166 ~ 66275599 (+)
G31149 NA non-coding downstream 277237 66343334 ~ 66394105 (+)
G31161 NA non-coding downstream 380064 66446161 ~ 66446404 (+)
G31181 NA non-coding downstream 387405 66453502 ~ 66454191 (+)
G31000 NA other upstream 227988 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 965991 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 966780 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 978573 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 1018375 65022419 ~ 65046978 (+)
G31355 NA other downstream 1148208 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1417238 67483335 ~ 67506898 (+)
G31407 NA other downstream 1431106 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1625344 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 1953943 68020040 ~ 68022940 (+)

Expression


Co-expression Network