G31119


Basic Information

Item Value
gene id G31119
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 66079904 ~ 66080258 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41798
actctgaaaactttgttttacgaaACTTCAAATCAAATTCcttattataaagaaaatcttgttgaaatatgaaatcatatttgactatattatttttccccttttattttttagcattagccactaactgctttttcaataaacacagtGACAGAACTGCGATTTTGGGgtattactatatatatgtaGGCGCTGGTgggggttgggtgtgtgtgaggactGTCCTCAGGTAACCTCGGGGCATAAACACAAGCCGACGCACTTTTTTGGTTTTAATTCAGGAACGTACATCCTACAGCAGGGGTCAATAATAGACGGACCGCGGTCCGGATCGGGGAAAAAAAACCCTCGCTcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41798 True 355 lncRNA 0.41 1 66079904 66080258

Neighbor

gene id symbol gene type direction distance location
LOC103035811 dnm3,dnm3a,LOC107712872,LOC107581471 coding upstream 11868 66007256 ~ 66068036 (+)
mettl13 mettl13,LOC107712871,LOC107733805 coding upstream 73443 65989532 ~ 66006461 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding upstream 148673 65908308 ~ 65931231 (+)
LOC103024186 LOC108415675 coding upstream 177488 65890930 ~ 65902416 (+)
LOC103025553 NA coding upstream 193166 65869348 ~ 65886738 (+)
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding downstream 16457 66096715 ~ 66273717 (+)
cnr1 cnr1,LOC104936193 coding downstream 256171 66336429 ~ 66341957 (+)
LOC103022286 snx14,LOC108427503,LOC108279824 coding downstream 269093 66349351 ~ 66388214 (+)
htr1b LOC108427470 coding downstream 600864 66681122 ~ 66684322 (+)
LOC103023947 impg1,LOC107660503 coding downstream 721333 66801591 ~ 66859895 (+)
G31091 NA non-coding upstream 13807 66065353 ~ 66066097 (+)
G31090 NA non-coding upstream 61653 66012182 ~ 66018251 (+)
G31012 NA non-coding upstream 208217 65871198 ~ 65871687 (+)
G30997 prdx6,LOC106584278 non-coding upstream 232757 65837418 ~ 65847147 (+)
G31009 NA non-coding upstream 244625 65833104 ~ 65835279 (+)
G31123 NA non-coding downstream 194908 66275166 ~ 66275599 (+)
G31149 NA non-coding downstream 263076 66343334 ~ 66394105 (+)
G31161 NA non-coding downstream 365903 66446161 ~ 66446404 (+)
G31181 NA non-coding downstream 373244 66453502 ~ 66454191 (+)
G31192 NA non-coding downstream 501544 66581802 ~ 66582566 (+)
G31000 NA other upstream 242539 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 980542 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 981331 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 993124 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 1032926 65022419 ~ 65046978 (+)
G31355 NA other downstream 1134047 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1403077 67483335 ~ 67506898 (+)
G31407 NA other downstream 1416945 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1611183 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 1939782 68020040 ~ 68022940 (+)

Expression


Co-expression Network