G31123


Basic Information

Item Value
gene id G31123
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 66275166 ~ 66275599 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41802
ACTAGGTTAGCCTTAAATGTggcttaaaaatacaaataaattaaacaagagCAAActgatttttacacattttacaagcTGTATTTCATAAATATGAATCAGAATATGAATCTGATCTGATGATTATTACGCTGGGCAGGAACAGTCCTACTGGTCAGGATCTTATGATGGGCGTGGTTTTACAGGGCAGCAGTTGAGTAATCTCTGTGTTGTTGTATTtgtagtatgtttttttttcaactgtgTTTTGCTTGAATCTGTGTTTGATTGCATCCGACCTCTGAACCTCTcctctgattttttttggacCTTTGATAGAAGCACCTGAGTAAAGATCAGTGGCTCTGACAGCTTCACCTTATCCTGCAAATTTTTTATgcctttccatttttttttttcttcgtttgAACCATTAAAGCAATACATGTCAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41802 True 434 lncRNA 0.36 1 66275166 66275599

Neighbor

gene id symbol gene type direction distance location
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding upstream 1449 66096715 ~ 66273717 (+)
LOC103035811 dnm3,dnm3a,LOC107712872,LOC107581471 coding upstream 207130 66007256 ~ 66068036 (+)
mettl13 mettl13,LOC107712871,LOC107733805 coding upstream 268705 65989532 ~ 66006461 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding upstream 343935 65908308 ~ 65931231 (+)
LOC103024186 LOC108415675 coding upstream 372750 65890930 ~ 65902416 (+)
cnr1 cnr1,LOC104936193 coding downstream 60830 66336429 ~ 66341957 (+)
LOC103022286 snx14,LOC108427503,LOC108279824 coding downstream 73752 66349351 ~ 66388214 (+)
htr1b LOC108427470 coding downstream 405523 66681122 ~ 66684322 (+)
LOC103023947 impg1,LOC107660503 coding downstream 525992 66801591 ~ 66859895 (+)
LOC111191093 LOC103025937 coding downstream 820299 67095898 ~ 67096914 (+)
G31119 NA non-coding upstream 194908 66079904 ~ 66080258 (+)
G31091 NA non-coding upstream 209069 66065353 ~ 66066097 (+)
G31090 NA non-coding upstream 256915 66012182 ~ 66018251 (+)
G31012 NA non-coding upstream 403479 65871198 ~ 65871687 (+)
G30997 prdx6,LOC106584278 non-coding upstream 428019 65837418 ~ 65847147 (+)
G31149 NA non-coding downstream 67735 66343334 ~ 66394105 (+)
G31161 NA non-coding downstream 170562 66446161 ~ 66446404 (+)
G31181 NA non-coding downstream 177903 66453502 ~ 66454191 (+)
G31192 NA non-coding downstream 306203 66581802 ~ 66582566 (+)
G31234 NA non-coding downstream 545590 66821189 ~ 66959582 (+)
G31000 NA other upstream 437801 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 1175804 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 1176593 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 1188386 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 1228188 65022419 ~ 65046978 (+)
G31355 NA other downstream 938706 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1207736 67483335 ~ 67506898 (+)
G31407 NA other downstream 1221604 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1415842 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 1744441 68020040 ~ 68022940 (+)

Expression


Co-expression Network