G31234


Basic Information

Item Value
gene id G31234
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 66821189 ~ 66959582 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU41939
aaaaaaaaaaaaacaaaaaaaaaacaaataaaagttcACTGACAAGTTGAGAAACATGTAAAGTGAGTCCTACTGCTCTCTCAGTGCGGACTTCGCTAGCGACTGCATTCTTCCCTTTGATCTAGACACCTGGAGTAGGAGTCCACGTACGCAAGTCTATGAGAACCCCTCTAGTGTGGCAGTGCCGTAAGTATTGGtcacatgagtgtgtgtgtgtttgtgtgtgt
>TU41940
aaaaaaaaaaaaacaaaaaaaaaacaaataaaagttcACTGACAAGTTGAGAAACATGTAAAGTGAGTCCTACTGCTCTCTCAGTGCGGACTTCGCTAGCGACTGCATTCTTCCCTTTGATCTAGACACCTGGAGTAGGAGTCCACGTACGCAAGTCTATGAGAACCCCTCTAGTGTGGCAGTGCCGTAAGTATTGGtcacatgagtgtgtgtgtgtttgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41939 True 227 lncRNA 0.35 3 66821189 66959582
TU41940 False 227 lncRNA 0.45 3 66823404 66959582

Neighbor

gene id symbol gene type direction distance location
htr1b LOC108427470 coding upstream 136867 66681122 ~ 66684322 (+)
LOC103022286 snx14,LOC108427503,LOC108279824 coding upstream 432975 66349351 ~ 66388214 (+)
cnr1 cnr1,LOC104936193 coding upstream 479232 66336429 ~ 66341957 (+)
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding upstream 547472 66096715 ~ 66273717 (+)
LOC103035811 dnm3,dnm3a,LOC107712872,LOC107581471 coding upstream 753153 66007256 ~ 66068036 (+)
LOC111191093 LOC103025937 coding downstream 136316 67095898 ~ 67096914 (+)
LOC111194387 NA coding downstream 138381 67097963 ~ 67100303 (+)
LOC103025937 LOC103025937 coding downstream 153614 67113196 ~ 67116181 (+)
LOC111194388 NA coding downstream 233646 67193228 ~ 67194052 (+)
LOC111194389 NA coding downstream 235934 67195516 ~ 67196427 (+)
G31192 NA non-coding upstream 238623 66581802 ~ 66582566 (+)
G31181 NA non-coding upstream 366998 66453502 ~ 66454191 (+)
G31161 NA non-coding upstream 374785 66446161 ~ 66446404 (+)
G31149 NA non-coding upstream 427084 66343334 ~ 66394105 (+)
G31123 NA non-coding upstream 545590 66275166 ~ 66275599 (+)
G31278 NA non-coding downstream 140790 67100372 ~ 67103483 (+)
G31370 NA non-coding downstream 391213 67350795 ~ 67354687 (+)
G31410 NA non-coding downstream 523011 67482593 ~ 67517034 (+)
G31406 NA non-coding downstream 530055 67489637 ~ 67579907 (+)
G31479 NA non-coding downstream 694567 67654149 ~ 67654605 (+)
G31000 NA other upstream 983824 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 1721827 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 1722616 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 1734409 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 1774211 65022419 ~ 65046978 (+)
G31355 NA other downstream 254723 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 523753 67483335 ~ 67506898 (+)
G31407 NA other downstream 537621 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 731859 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 1060458 68020040 ~ 68022940 (+)

Expression


Co-expression Network