G31278


Basic Information

Item Value
gene id G31278
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 67100372 ~ 67103483 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42000
tccatcgagggggtcgaCGTGGAGGTGGTCAAATCCTACAaataccttggtgtgcacctggacgacaggctggactggtcagtgaacactgactccctctacaggaaggctcagagcagactgtacttcctcagaaggctcagggctttcaacatctgccagaaactcctcctgatgttctaccagtctgtggtagccagcgtcctcttttacactgttgtgtgttggggaggcagcatcagcaagagggatgctggacgactggacaggctggtgaggaaagctggttctgtgctgggattagagctggagtccttaacaccactggcagagaggagagccctcagtaagctgctgaacatcatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42000 True 369 lncRNA 0.47 2 67100372 67103483

Neighbor

gene id symbol gene type direction distance location
LOC111194387 NA coding upstream 69 67097963 ~ 67100303 (+)
LOC111191093 LOC103025937 coding upstream 3458 67095898 ~ 67096914 (+)
LOC103023947 impg1,LOC107660503 coding upstream 240477 66801591 ~ 66859895 (+)
htr1b LOC108427470 coding upstream 416050 66681122 ~ 66684322 (+)
LOC103022286 snx14,LOC108427503,LOC108279824 coding upstream 712158 66349351 ~ 66388214 (+)
LOC103025937 LOC103025937 coding downstream 9713 67113196 ~ 67116181 (+)
LOC111194388 NA coding downstream 89745 67193228 ~ 67194052 (+)
LOC111194389 NA coding downstream 92033 67195516 ~ 67196427 (+)
LOC103028999 NA coding downstream 412449 67515932 ~ 67528356 (+)
swt1 NA coding downstream 430332 67533815 ~ 67579081 (+)
G31234 NA non-coding upstream 140790 66821189 ~ 66959582 (+)
G31244 NA non-coding upstream 182603 66892429 ~ 66917769 (+)
G31192 NA non-coding upstream 517806 66581802 ~ 66582566 (+)
G31181 NA non-coding upstream 646181 66453502 ~ 66454191 (+)
G31161 NA non-coding upstream 653968 66446161 ~ 66446404 (+)
G31370 NA non-coding downstream 247312 67350795 ~ 67354687 (+)
G31410 NA non-coding downstream 379110 67482593 ~ 67517034 (+)
G31406 NA non-coding downstream 386154 67489637 ~ 67579907 (+)
G31479 NA non-coding downstream 550666 67654149 ~ 67654605 (+)
G31512 arpc5,LOC103045524,LOC104921830,LOC108431159,LOC107677751,LOC107722639 non-coding downstream 757150 67860633 ~ 67862273 (+)
G31000 NA other upstream 1263007 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 2001010 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 2001799 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 2013592 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 2053394 65022419 ~ 65046978 (+)
G31355 NA other downstream 110822 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 379852 67483335 ~ 67506898 (+)
G31407 NA other downstream 393720 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 587958 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 916557 68020040 ~ 68022940 (+)

Expression


Co-expression Network