G31410


Basic Information

Item Value
gene id G31410
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 67482593 ~ 67517034 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42192
AAAAAAGAGGGGCTTACAgagcctcccccctcccccacctcgGAGCGTCTGACCACCTaaccattatgctaatgccagcttacagaccactggttaaaaGTCCACCAAAACCAGTTCTGAAGCAGGTACGAGTGTggccagagggttcctcagaggcacttcaggactgtttcagctaggcctggacaataattcgataacGGTATTTATCGCggtaagaaatgtttcaataacggtgatatcatttttgtgtcatatcgatatgtattatttacagaaacacGGCTCAGCTGCGCTCCGTTCGGcccctaaaatctctcgcgctgaaactcggccgcgctccggtcagcatctaaaatctctcacgctgaaaatctctcacgctgaaaatctctcgcgctgaaactcggccgctccggtcagcatctaaaagctctcgcgctgaagctcggccgcgctccggtcagcatctaaaacctctcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42192 True 483 lncRNA 0.50 2 67482593 67517034

Neighbor

gene id symbol gene type direction distance location
LOC111194389 NA coding upstream 286166 67195516 ~ 67196427 (+)
LOC111194388 NA coding upstream 288541 67193228 ~ 67194052 (+)
LOC103025937 LOC103025937 coding upstream 366412 67113196 ~ 67116181 (+)
LOC111194387 NA coding upstream 382290 67097963 ~ 67100303 (+)
LOC111191093 LOC103025937 coding upstream 385679 67095898 ~ 67096914 (+)
swt1 NA coding downstream 16781 67533815 ~ 67579081 (+)
LOC103045824 LOC108256302,LOC108439581 coding downstream 361506 67878540 ~ 67929915 (+)
LOC103035042 LOC108439590 coding downstream 487200 68004234 ~ 68018991 (+)
ppp4r3a ppp4r3a,smek1,LOC107555622,LOC107726626,LOC107698404,LOC107696138,LOC107601285 coding downstream 506903 68023937 ~ 68042368 (+)
nbas nbas,LOC108442060,LOC108439588,LOC106593169,LOC102775840 coding downstream 835393 68352427 ~ 68724643 (+)
G31370 NA non-coding upstream 127906 67350795 ~ 67354687 (+)
G31278 NA non-coding upstream 379110 67100372 ~ 67103483 (+)
G31234 NA non-coding upstream 523011 66821189 ~ 66959582 (+)
G31244 NA non-coding upstream 564824 66892429 ~ 66917769 (+)
G31192 NA non-coding upstream 900027 66581802 ~ 66582566 (+)
G31479 NA non-coding downstream 137115 67654149 ~ 67654605 (+)
G31512 arpc5,LOC103045524,LOC104921830,LOC108431159,LOC107677751,LOC107722639 non-coding downstream 343599 67860633 ~ 67862273 (+)
G31583 NA non-coding downstream 470399 67987433 ~ 67987677 (+)
G31595 NA non-coding downstream 558163 68075197 ~ 68075581 (+)
G31596 NA non-coding downstream 579781 68096815 ~ 68097060 (+)
G31355 NA other upstream 267407 67214305 ~ 67215186 (+)
G31000 NA other upstream 1645228 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 2383231 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 2384020 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 2395813 65077780 ~ 65086780 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 174407 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 503006 68020040 ~ 68022940 (+)
G31702 fam84a other downstream 1309609 68826643 ~ 68827572 (+)
G31718 sec63,LOC107726621,LOC107696131,LOC107726458 other downstream 1490407 69007441 ~ 69161883 (+)
G31939 NA other downstream 2679891 70196925 ~ 70199742 (+)

Expression


Co-expression Network