G31437


Basic Information

Item Value
gene id G31437
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 67503749 ~ 67528337 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42226
ttttatttatttggttataCACACATGATCAACAagtaagtgaaaaaaaagttaactaaaCAATGAATcacttctttataaaacatgtCAAACTAAACATCACTAGATTTTAACCTTATACAGtggcatttaaatgtttaatggcATTTAAAAATCACCAGCACACCATCTGGTTAGTTAGCTGTTCAAGGTAACAAGTATTTTGCCCAGGGGTGCCCCAAAAAGTGCAGCATTTGTATAGCATTATACTAATTAACTCTTTCAATAGCATACTGCCAGTACTTGCAGAACATTGAAATGGCACAAAAGTTGGAACGTATACTTAGTCCTGTTTAACTAGATTTATTTCAGTTCagagttttaagtgttcagaacCGCACTAACTTGTTAAAACTTACAGAACCACAGAAACCGAACATACATTAACAATATGTCTACAAGTTGTGTGATTTTCTTTTGTCATATAAGTGActcctgctactactactgacACTCTTAAAGTAAATAATGTAatgaaacataaataataagttCAGTTGTGTGAAGGAACACAATCGCCTGATTTAAGTCAGTTTCAGAGAAAGGGATCAAGCCTAGGAAACTGACATGGGTATGCAAGCAAACGctttaactcaaaaaccatTATCCACCAAACTATTTGATAGGACTTTCCTCACATGgcataaacaaaacattatgCAGTATTATAAGCAACCCATAGCCCACAGTGGTTTCTAGCACAGAGTCACAGATGAGGAACCCAAAAAGGAATCGAGTGTAAAGCCAGGATAAAGGGGTTTGGTGAACTCGGCCTGTGTTTTGTACAGCAGTGTCATAGGGCCTTGGGAACAAACACGATAGAAAGCCAATACACCTGCATCTTCATCTAGATAAACTCCTATATGTTCTGGTGGATATGTGGAGACATCTGTGACAATGCTGTTGTGTCGGAATTTGCAAAAATAACGATCACATTCCAAGCTCCAAGACTGATCGTTATATCCAAACTTGCTACTGTCACCACATGCATTCCTGACTATACTTCCATAAGACAGAGCGATATTGACCTTGTCCTGCCACTTAACCTCCCAGTAACAGCACCCTCTTACGGCACCATCACAGAGAACTTGATTTGTATGAATAAATCTGTCTGCATGAGGCTCAGCAGTGGAATATGTTCCATATGAACGGAACTGAACCTTACGGTTCTCTTCAGACAGCTGTAGAGACGAGTTACATGAGTCGGGTGACAGCTTCAGCTGGcagtaatGCTTTTTGAACTCCAGTCTGGTCTTGGGTTTGGGTGGCAGGattatattaatttgtttaaCACCAGTGTTCATCTCTATCATTTCCTCATCAAAGAGTTTCTTCATCTGCTCCTTCAGCCCTAATAAAAGATGACTGGCACTCAGAAATGAGTGATTGTTGCTCACAGGGTTGCTTCTGGGGACCTCAGACTCAGCAACTGCAGTGAGAGAAAGGAATTTCTGCAGGCAGAGTATGGGGTCATCAGTGTGTTTCAGCTGACTGCATTCAGCGTCACTCCGCTTAAGATGAGCAATCACCTGCTCCAGCTTCTTCTGGAGCATGTGTGTTTGGTGCAACTCTTTCTTCTCATAGTATTGGATCATGTAACAGAACAGAGACAGGTTCTTCTCCATGTACTTAGTTATCTCAGCCAGGAACTCCTTACTTAAGTCCATGGCCACCTGTGCTGAAGTGGAGTAAGCCTTCACAGCCTCATTAAGTGCCTGCAACTCTTTTTCCCGACACTGTATTAGTGCATGAAATCTTTCTTGGATCTTTTGCAGTGGTTTCTGCTGTAGTCTGCACCACTCTTTAGCAGCAGAGACTGTGGTGTGGCCACTGTGCTCGTCCATAGCGCACAGCAGGCAGATACAGCGCTTGTCCTGGACACAGAAGACCTCCAGGAGCTTGTTGTGTCGGGAGCAGATCATCTCCTGCAGGCCTGAAGTGGCTTCTACCAGCGCGTGTCTCTGGAGGACGGGGAACTGGAGGTGAGGTCTGAGGTGTGTCTCACAGAAGGAGGCCACGCAGGTGAGGCAGGACTTCACGGCCCTGCTCTTCACCGCTCCGCTGCAGAAGTTACACTCCCCCCCGAGTGAGGCTGAGCCCGGGCTGGAGCCCCGAGGCTCCGCGGGGCTGGGCTCCACACTGTCCAGCACTTCAGACAGCACGGTGCTCCGGTTGAGGGCAGGCCTCGCGGGGAAGCAGCCCCTGCACTGCGGGCAGCTCACCGCCTTCTTCTGGAGCTGCTCCTCATCCCAGCACTGAGAGATACACCTCTTACAGTAACTGTGACCACACGGTATCGTTACCGGATCCCGGAGACGCTCCAGACACACCGGACAGCTCAGAAAACCCACACAGCCCCCTGACCGAAGCATAGCAGCTGCAGGAAACCAGGGTTTTCACTGTACCAACGAGCTGCTTTATCTATGAACACCACTACTCCAAATAACAGAAGCAACACAACCATCAGGACACCAATAACTGCAtaaaatgaaacacacacaactgTAACCATAAGAGTTAAAAATGATGCAGTCTTTTATGCTGAatcaaatggatttttttcttttacctaaATGTTGGACTTGTTTAGAAGGATCCTGACCTCCTGTTTTTGGGTCTGCTGTCAGTCAGTATGtgaataaacaattaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42226 True 2693 TUCP 0.36 7 67503749 67528337

Neighbor

gene id symbol gene type direction distance location
nek1 NA coding downstream 23962 67434969 ~ 67479787 (-)
sh3rf1 sh3rf1,LOC107683940,LOC107739375,LOC107597452,LOC107755262 coding downstream 87857 67352889 ~ 67415892 (-)
LOC103032908 LOC108427497,LOC100690439 coding downstream 187998 67214548 ~ 67315751 (-)
LOC103026745 LOC108427498 coding downstream 335673 67156457 ~ 67168076 (-)
LOC103026240 LOC103026240,LOC108427476,LOC105895132,LOC108274573 coding downstream 352323 67128169 ~ 67151426 (-)
LOC103030302 ivns1abp,ivns1abpa,LOC108256770,LOC107732388,LOC107726450,LOC107553504 coding upstream 56774 67585111 ~ 67606176 (-)
trnai-aau NA coding upstream 129128 67657465 ~ 67657537 (-)
trnai-aau_1 NA coding upstream 129289 67657626 ~ 67657698 (-)
trnai-aau_2 NA coding upstream 129844 67658181 ~ 67658253 (-)
trnat-agu_1 NA coding upstream 130242 67658579 ~ 67658651 (-)
G31385 NA non-coding downstream 187576 67315844 ~ 67316173 (-)
G31352 NA non-coding downstream 299500 67203958 ~ 67204249 (-)
G31329 NA non-coding downstream 380809 67122629 ~ 67122940 (-)
G31303 NA non-coding downstream 406207 67089429 ~ 67097542 (-)
G31316 NA non-coding downstream 445315 67058059 ~ 67058434 (-)
G31480 NA non-coding upstream 125813 67654150 ~ 67654617 (-)
G31482 NA non-coding upstream 129238 67657575 ~ 67659085 (-)
LOC111191948 NA non-coding upstream 157029 67685366 ~ 67686312 (-)
G31546 hmcn1,LOC106560561 non-coding upstream 305086 67833423 ~ 67835048 (-)
G31523 hmcn1,LOC107599116 non-coding upstream 314947 67843284 ~ 67889027 (-)
G31424 NA other downstream 71325 67423872 ~ 67432424 (-)
LOC103031958 myo6 other downstream 459431 66862465 ~ 67044318 (-)
trnad-guc_8 NA other downstream 2406076 65097602 ~ 65097673 (-)
trnad-guc_7 NA other downstream 2410600 65093078 ~ 65093149 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other downstream 2704573 64774684 ~ 64799176 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other upstream 327269 67855606 ~ 67885433 (-)
LOC103046133 LOC108439589 other upstream 404223 67932560 ~ 67940713 (-)
G31622 NA other upstream 562883 68091220 ~ 68091581 (-)
fam84a fam84a other upstream 1297652 68825989 ~ 68829020 (-)
sec63 sec63,LOC107726621,LOC107696131,LOC107726458 other upstream 1616971 69145308 ~ 69161904 (-)

Expression


Co-expression Network