G31583


Basic Information

Item Value
gene id G31583
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 67987433 ~ 67987677 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42411
gaaagcccagcgcagtgcaaattgaaaagcgctgcaaaagcacaaaacacatccatcaaaattacaacacaggcgcagcaaatagaaaaacgcgctgcaaatagaaaaacgcgctgcaaaaagaaaaacgcgctgcaaaaagaaaaacgcgctgcaaatagaaaaacgcgctgcaaaaagaaaaacgcgctgcaaatagaaccacaacacaacggaattttcccgggggaccttaaaagatgctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42411 True 245 lncRNA 0.42 1 67987433 67987677

Neighbor

gene id symbol gene type direction distance location
LOC103045824 LOC108256302,LOC108439581 coding upstream 57518 67878540 ~ 67929915 (+)
swt1 NA coding upstream 408352 67533815 ~ 67579081 (+)
LOC103028999 NA coding upstream 459077 67515932 ~ 67528356 (+)
LOC111194389 NA coding upstream 791006 67195516 ~ 67196427 (+)
LOC111194388 NA coding upstream 793381 67193228 ~ 67194052 (+)
LOC103035042 LOC108439590 coding downstream 16557 68004234 ~ 68018991 (+)
ppp4r3a ppp4r3a,smek1,LOC107555622,LOC107726626,LOC107698404,LOC107696138,LOC107601285 coding downstream 36260 68023937 ~ 68042368 (+)
nbas nbas,LOC108442060,LOC108439588,LOC106593169,LOC102775840 coding downstream 364750 68352427 ~ 68724643 (+)
nr2e1 nr2e1,LOC107726614,LOC107601200,LOC107726424,LOC107602776 coding downstream 1216157 69203834 ~ 69215863 (+)
afg1l NA coding downstream 1256041 69243718 ~ 69279965 (+)
G31512 arpc5,LOC103045524,LOC104921830,LOC108431159,LOC107677751,LOC107722639 non-coding upstream 125160 67860633 ~ 67862273 (+)
G31479 NA non-coding upstream 332828 67654149 ~ 67654605 (+)
G31406 NA non-coding upstream 407526 67489637 ~ 67579907 (+)
G31410 NA non-coding upstream 470399 67482593 ~ 67517034 (+)
G31370 NA non-coding upstream 632746 67350795 ~ 67354687 (+)
G31595 NA non-coding downstream 87520 68075197 ~ 68075581 (+)
G31596 NA non-coding downstream 109138 68096815 ~ 68097060 (+)
G31629 NA non-coding downstream 293663 68281340 ~ 68281596 (+)
G31648 NA non-coding downstream 637612 68625289 ~ 68660107 (+)
G31715 NA non-coding downstream 978802 68966479 ~ 68966810 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other upstream 142799 67691441 ~ 67844634 (+)
LOC103027733 NA other upstream 480535 67483335 ~ 67506898 (+)
G31407 NA other upstream 489736 67497203 ~ 67497697 (+)
G31355 NA other upstream 772247 67214305 ~ 67215186 (+)
G31000 NA other upstream 2150068 65828781 ~ 65837365 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 32363 68020040 ~ 68022940 (+)
G31702 fam84a other downstream 838966 68826643 ~ 68827572 (+)
G31718 sec63,LOC107726621,LOC107696131,LOC107726458 other downstream 1019764 69007441 ~ 69161883 (+)
G31939 NA other downstream 2209248 70196925 ~ 70199742 (+)
G32009 cdc40 other downstream 2315359 70303036 ~ 70329028 (+)

Expression


Co-expression Network