G31622


Basic Information

Item Value
gene id G31622
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 68091220 ~ 68091581 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42459
atgggctcatcaaaacaactctcaaatgatctaaaaacaaagattgttcaacatagttgttcaggggaaggatacaaaaagttgtctcagagatttaacctgtcagtttccactgtgaggaacatagtaagggaATGGAAGACAAAAGgaagggacagttcttgtttagcccagaagtggcaggtcaagaaaaatatcagaaaggcagagaagaagaatggtgagaacagtcaaggacaatccacagaccacctccaaagagctgcagcatcatcttgctgcagatggtgtcactgtgcatcagtcaacaatacagcgcactttgcacaaggagaagctgtatgggagagtgatgcgaaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42459 True 362 TUCP 0.46 1 68091220 68091581

Neighbor

gene id symbol gene type direction distance location
LOC103046744 NA coding downstream 109292 67973225 ~ 67981928 (-)
LOC103046427 LOC108439583 coding downstream 118862 67968136 ~ 67972358 (-)
LOC103045211 NA coding downstream 237447 67852557 ~ 67853773 (-)
trnat-agu_1 NA coding downstream 432569 67658579 ~ 67658651 (-)
trnai-aau_2 NA coding downstream 432967 67658181 ~ 67658253 (-)
mycn LOC108439586 coding upstream 132243 68223824 ~ 68229829 (-)
ddx1 ddx1,LOC107726609 coding upstream 248244 68339825 ~ 68351833 (-)
scml4 scml4,LOC107726459,LOC107679489,LOC107726622,LOC107601197 coding upstream 1004673 69096254 ~ 69140809 (-)
LOC111191181 NA coding upstream 1076219 69167800 ~ 69172924 (-)
ostm1 ostm1 coding upstream 1088644 69180225 ~ 69187900 (-)
G31616 NA non-coding downstream 60230 68029478 ~ 68030990 (-)
G31598 erh,ERH,LOC107580641,LOC105904210,LOC106607637,LOC100699790 non-coding downstream 68333 68020087 ~ 68022887 (-)
G31573 NA non-coding downstream 148067 67942909 ~ 67943153 (-)
G31572 NA non-coding downstream 148513 67942497 ~ 67942707 (-)
G31564 LOC108439581,LOC108256302,LOC106571171 non-coding downstream 170866 67915459 ~ 67920354 (-)
G31630 NA non-coding upstream 205283 68296864 ~ 68297068 (-)
G31686 NA non-coding upstream 694819 68786400 ~ 68787002 (-)
G31782 NA non-coding upstream 967173 69058754 ~ 69059080 (-)
G31803 NA non-coding upstream 1188087 69279668 ~ 69281508 (-)
G31817 NA non-coding upstream 1255452 69347033 ~ 69347700 (-)
LOC103046133 LOC108439589 other downstream 150507 67932560 ~ 67940713 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other downstream 205787 67855606 ~ 67885433 (-)
G31437 NA other downstream 562883 67503749 ~ 67528337 (-)
G31424 NA other downstream 658796 67423872 ~ 67432424 (-)
LOC103031958 myo6 other downstream 1046902 66862465 ~ 67044318 (-)
fam84a fam84a other upstream 734408 68825989 ~ 68829020 (-)
sec63 sec63,LOC107726621,LOC107696131,LOC107726458 other upstream 1053727 69145308 ~ 69161904 (-)
LOC103033556 LOC108410406 other upstream 2826400 70917981 ~ 71043182 (-)
G32343 NA other upstream 2997294 71088875 ~ 71089461 (-)
G32364 NA other upstream 3046905 71138486 ~ 71142338 (-)

Expression


Co-expression Network