G58162


Basic Information

Item Value
gene id G58162
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13347828 ~ 13348267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66227
CTTTTGGTAAGTTAATTAAATGTTGTGGTTATTGTTGTTGTTAACTGATAAACTTTATCAAAACAGAGGAAATTGAAGGTTTATTAAGTGTTAACAATGAGATTATGTGGTTTTTATAATCAATTAACACTGCTTTTGTCATTTTTTACAAGATGGACAAAATTTGTCACCAAAAAAGTCATTCTGTTTAACCAAAATTTCGGTTTTACCGAATGACACTTTTGGTTATACTGAATGACAATATTTTCAAACAATGCTAACAGGCTGATATATAGTTAGCTAGCTGAAATTTTATATTTAGTACAAGTTTTTCAAATATTACAACATTTTCCATGTTTTTTAGCGGTTGTACCGAATGACCTGATGTTTCGGGTCATGCGTATGAGCAAGTGAAAACATGAATTTTTCAAATAGTTAAAAGAGAGTTAGTTACTTTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66227 True 440 lncRNA 0.29 1 13347828 13348267

Neighbor

gene id symbol gene type direction distance location
CI01000009_13194613_13197758 NA coding upstream 148127 13194437 ~ 13199701 (+)
CI01000009_12854692_12859028 NA coding upstream 486797 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 693971 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 842934 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 911937 12432538 ~ 12436017 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 44039 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 200736 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 348258 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 404157 13752424 ~ 13753823 (+)
CI01000009_13798741_13799037 NA coding downstream 448617 13796884 ~ 13799191 (+)
G58161 NA non-coding upstream 159 13347426 ~ 13347669 (+)
G58160 NA non-coding upstream 675 13346915 ~ 13347153 (+)
G58159 NA non-coding upstream 1082 13346499 ~ 13346746 (+)
G58155 NA non-coding upstream 3349 13344180 ~ 13344479 (+)
G58153 NA non-coding upstream 11966 13335635 ~ 13335862 (+)
G58171 NA non-coding downstream 3555 13351822 ~ 13352049 (+)
G58173 NA non-coding downstream 4110 13352377 ~ 13352601 (+)
G58175 NA non-coding downstream 5113 13353380 ~ 13353599 (+)
G58176 NA non-coding downstream 5421 13353688 ~ 13353910 (+)
G58179 NA non-coding downstream 9651 13357918 ~ 13358120 (+)
G58028 NA other upstream 204220 13140378 ~ 13143608 (+)
G57701 NA other upstream 324690 13006643 ~ 13023138 (+)
G57691 NA other upstream 429363 12906444 ~ 12918465 (+)
G57682 NA other upstream 455489 12825469 ~ 12892339 (+)
G58382 NA other downstream 685292 14039757 ~ 14039901 (+)
G58455 NA other downstream 898428 14246695 ~ 14258526 (+)
G58558 NA other downstream 1148669 14496936 ~ 14501514 (+)
G58649 NA other downstream 1301457 14649724 ~ 14652022 (+)
G58711 NA other downstream 1418392 14766659 ~ 14773773 (+)

Expression


Co-expression Network