G31856


Basic Information

Item Value
gene id G31856
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 69523958 ~ 69524587 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU42762
TACCTGCGATGTCCCACAGCTGCAGCCGGACTAGTGTTTTGCTGTCCCAGTTGATGACTTTGAGAGCGAAGTCCACGCCGATGGTGGCTCTGTAGTGCTGGGAGAAGAGCTGGTGTACGTATCGTTTGATGATGCTGGTCTTTCCCACTCCCAGTTCACCGATCACCAGAACTTTGAACAGGTACTCCTTACACTCGGACACCGAGCCGCCGgccatgctgctgctgctactgccgcTGCTACAGCCAGTGAGTGACAGTTACCGAGAGACCCGACAACTTCCCACAACTTCCCACCAACACTTCCACTTTTTCTCTaaatctgtctctgtctctctgtcctgcAGTCAGGCCGGGAGAGGAGTTCAGTGTGTGTCtgggtgagagtgagagagagagaggtgataTAAAAGAGAAAGCGCAGTAAGAGTCTGCCCCTCTCCTCCTGACGGACAACCACCTGATAAGTCACAGGACCCGGAAATCTCCAAATCTCTCACACGGGCGAGGCTAAACTCTCCCCTCAGCTCCCCTGTGCGCGTgagtgaatgtgaatgtgagtgtgagagagagagagagagagagagagtgagtgagtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42762 True 599 lncRNA 0.54 2 69523958 69524587

Neighbor

gene id symbol gene type direction distance location
cd164 NA coding downstream 54883 69455687 ~ 69469075 (-)
sesn1 sesn1,LOC107601436,LOC107696127 coding downstream 85408 69361081 ~ 69438550 (-)
snx3 snx3 coding downstream 280326 69223291 ~ 69243632 (-)
ostm1 ostm1 coding downstream 336058 69180225 ~ 69187900 (-)
LOC111191181 NA coding downstream 351034 69167800 ~ 69172924 (-)
slc22a16 slc22a16,LOC107693213,LOC107602826,LOC107726421,LOC107696098,LOC107601215 coding upstream 690407 70214994 ~ 70232029 (-)
cdc40 cdc40 coding upstream 777586 70302173 ~ 70329055 (-)
mia3 NA coding upstream 928359 70452946 ~ 70472584 (-)
hlx hlx,LOC102784911 coding upstream 1061308 70585895 ~ 70588997 (-)
rhpn1 rhpn1,LOC107704026 coding upstream 1076241 70600828 ~ 70619887 (-)
G31847 NA non-coding downstream 73231 69441420 ~ 69450727 (-)
G31817 NA non-coding downstream 176258 69347033 ~ 69347700 (-)
G31803 NA non-coding downstream 242450 69279668 ~ 69281508 (-)
G31782 NA non-coding downstream 464878 69058754 ~ 69059080 (-)
G31686 NA non-coding downstream 736956 68786400 ~ 68787002 (-)
G31946 NA non-coding upstream 175759 69700346 ~ 69761943 (-)
G31973 sash1 non-coding upstream 553046 70077633 ~ 70078333 (-)
G31974 NA non-coding upstream 553979 70078566 ~ 70104434 (-)
G31980 sash1 non-coding upstream 572991 70097578 ~ 70170931 (-)
G31990 NA non-coding upstream 672157 70196744 ~ 70199737 (-)
sec63 sec63,LOC107726621,LOC107696131,LOC107726458 other downstream 362054 69145308 ~ 69161904 (-)
fam84a fam84a other downstream 694938 68825989 ~ 68829020 (-)
G31622 NA other downstream 1432377 68091220 ~ 68091581 (-)
LOC103046133 LOC108439589 other downstream 1583245 67932560 ~ 67940713 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other downstream 1638525 67855606 ~ 67885433 (-)
LOC103033556 LOC108410406 other upstream 1393394 70917981 ~ 71043182 (-)
G32343 NA other upstream 1564288 71088875 ~ 71089461 (-)
G32364 NA other upstream 1613899 71138486 ~ 71142338 (-)
G32492 NA other upstream 2445917 71970504 ~ 71982053 (-)
G32557 NA other upstream 2716943 72241530 ~ 72242270 (-)

Expression


Co-expression Network