G32316


Basic Information

Item Value
gene id G32316
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 70965016 ~ 70973557 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43391
ttgttgaccgatgcacagtgacaccatctgcagcaagatgatgctgcagctctttggaggtggtctgtggattgtccttgactgttctccccattcttcttctctgcctttctgatatttttcttggcctgccacttctgggcttaacaagaactgtccctgtggtcttccatttccttactatgttcctcacagtggaaactgacaggttaaatctctgagacaactttttgtatccttcccctgaacaactatgttgaacaatctttgtttttagatcatttgagagttgttttgatgagcccatgatgccactcttcagaggagatttaaataggagaacaacttgcaattggccaccttaaataccttttctcatgattggatacacctggctatgaagttcaaagctcaatgaggttaccaaaccaattttgtgcttcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43391 True 445 lncRNA 0.42 2 70965016 70973557

Neighbor

gene id symbol gene type direction distance location
tshr tshr coding downstream 49366 70870863 ~ 70915650 (-)
brox brox,LOC107732498,LOC107710643,LOC107568230 coding downstream 97354 70856750 ~ 70867662 (-)
c3h8orf82 cunh8orf82,LOC103038903,LOC107704038,LOC107567028 coding downstream 321691 70640472 ~ 70643325 (-)
naprt LOC107728101,LOC107746003 coding downstream 325090 70622015 ~ 70639926 (-)
rhpn1 rhpn1,LOC107704026 coding downstream 345129 70600828 ~ 70619887 (-)
snw1 snw1,LOC107681047,LOC106608236 coding upstream 80888 71054445 ~ 71060960 (-)
LOC103038639 ism2 coding upstream 103553 71077110 ~ 71086957 (-)
trnat-ugu_81 NA coding upstream 123074 71096631 ~ 71096703 (-)
ccnk ccnk,LOC107560198,LOC107555300,LOC107678663 coding upstream 126045 71099602 ~ 71105819 (-)
pigc pigc,LOC107581520,LOC107697628,LOC107712841,LOC107597814 coding upstream 200672 71174229 ~ 71177206 (-)
G32285 NA non-coding downstream 147313 70817272 ~ 70817703 (-)
G32279 NA non-coding downstream 171152 70793302 ~ 70793864 (-)
G32275 NA non-coding downstream 187166 70777149 ~ 70777850 (-)
G32267 NA non-coding downstream 214198 70748226 ~ 70750818 (-)
G32264 pycrl non-coding downstream 226537 70736265 ~ 70738479 (-)
G32327 NA non-coding upstream 52132 71025689 ~ 71028881 (-)
G32326 NA non-coding upstream 52946 71026503 ~ 71029286 (-)
G32344 NA non-coding upstream 116944 71090501 ~ 71093213 (-)
G32346 NA non-coding upstream 187745 71161302 ~ 71163064 (-)
G32375 NA non-coding upstream 280783 71254340 ~ 71257919 (-)
sec63 sec63,LOC107726621,LOC107696131,LOC107726458 other downstream 1803112 69145308 ~ 69161904 (-)
fam84a fam84a other downstream 2135996 68825989 ~ 68829020 (-)
G31622 NA other downstream 2873435 68091220 ~ 68091581 (-)
LOC103046133 LOC108439589 other downstream 3024303 67932560 ~ 67940713 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other downstream 3079583 67855606 ~ 67885433 (-)
G32343 NA other upstream 115318 71088875 ~ 71089461 (-)
G32364 NA other upstream 164929 71138486 ~ 71142338 (-)
G32492 NA other upstream 996947 71970504 ~ 71982053 (-)
G32557 NA other upstream 1267973 72241530 ~ 72242270 (-)
G32611 NA other upstream 1554226 72527783 ~ 72542447 (-)

Expression


Co-expression Network