G32556


Basic Information

Item Value
gene id G32556
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72242485 ~ 72242811 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43688
CTCCTGTAGCTTTACCAGAGGCAGCCGTCCGGTCTCCCCGGTGTACGGAGTGAGTCTCGAGCTGAATAGCGCTGTCCGGAACTTTATCCGAGAGCCAGGTTTCAGTGAAAATCAGAGCGCAACACTCTCTCATTTCCCGCTGCGATGTAATCCTTGCTCTCAGCTCGTCCAGTTTGTTTTCCAGAGAGCGCACATTAGCTAGCAAGAGGCTAGGCACCGGTGGTCTGCTAGCGCGAGCCTTTAGCCTAGCATGTAGCCCTCCCCTCTTGCCCCGCTTGCGTCGCCGCCTCCGAAGCGCTCTTCTGGGGTCAGCACACGCGCTCTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43688 True 327 lncRNA 0.32 1 72242485 72242811

Neighbor

gene id symbol gene type direction distance location
LOC111191956 NA coding upstream 34349 72206947 ~ 72208136 (+)
plpp3 plpp3,LOC107712879,LOC107716555,LOC107697342,LOC107657212 coding upstream 158240 72036206 ~ 72084245 (+)
LOC107197929 NA coding upstream 244844 71988157 ~ 71997641 (+)
LOC111191308 LOC108415780 coding upstream 541191 71698448 ~ 71701294 (+)
oma1 LOC107581495 coding upstream 903185 71316242 ~ 71339300 (+)
dhcr24 dhcr24,LOC107581458,LOC107687183,LOC107566150 coding downstream 316546 72559357 ~ 72567455 (+)
LOC103033168 si:ch211-121a2.4,LOC103033168,LOC108416079,LOC107581514,LOC108257924,LOC107687197,LOC107712847 coding downstream 361402 72604213 ~ 72610182 (+)
sirt5 sirt5,LOC107687181,LOC107712885,LOC107581456 coding downstream 384429 72627240 ~ 72636248 (+)
LOC111191362 LOC108416099,LOC107559745,LOC107712833,LOC108248366 coding downstream 412008 72654819 ~ 72679083 (+)
LOC103023468 vsnl1a,LOC103023468,LOC103379314,LOC107378186,LOC102798040,LOC104929407,LOC107553484 coding downstream 500207 72743018 ~ 72777057 (+)
G32539 NA non-coding upstream 91694 72150568 ~ 72150791 (+)
G32535 NA non-coding upstream 93009 72149275 ~ 72149476 (+)
LOC111191996 NA non-coding upstream 779608 71457906 ~ 71462877 (+)
G32379 NA non-coding upstream 950626 71261305 ~ 71291859 (+)
G32219 NA non-coding upstream 1110444 71129690 ~ 71132041 (+)
G32570 NA non-coding downstream 79850 72322661 ~ 72323006 (+)
G32579 NA non-coding downstream 120140 72362951 ~ 72363341 (+)
G32630 NA non-coding downstream 322198 72565009 ~ 72595678 (+)
G32644 NA non-coding downstream 383585 72626396 ~ 72626685 (+)
G32713 NA non-coding downstream 454638 72697449 ~ 72697765 (+)
dab1 dab1,LOC107581465 other upstream 262122 71463100 ~ 71980363 (+)
G32229 NA other upstream 1072929 71167524 ~ 71169556 (+)
G32225 NA other upstream 1101301 71137512 ~ 71141184 (+)
G32198 NA other upstream 1166599 71073848 ~ 71075886 (+)
G32151 brox,LOC107710643,LOC107732498,LOC107568230 other upstream 1374842 70856811 ~ 70867643 (+)
usp24 usp24 other downstream 160723 72403534 ~ 72497064 (+)
G32641 NA other downstream 353095 72595906 ~ 72596937 (+)
sf3b6 SF3B6,sf3b6,pm14 other downstream 538982 72781793 ~ 72786363 (+)
cd2ap cd2ap other downstream 901839 73144650 ~ 73196220 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other downstream 1196245 73439056 ~ 73506987 (+)

Expression


Co-expression Network