G32557



Basic Information


Item Value
gene id G32557
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72241530 ~ 72242270 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU43689
GAGACGGCTCACCCTGATGCCGTCATCATCACAGCTGGTGATTTTAATCAGTGCAACCTACGGACTGTATTCCACAATTACTACCAACATGTGGATATTCCTACACGAGATAAAAACACGCTGGATCACGTGTACAGTAATTTGGACAATCAGACCACATCTCCCTATTCCTGTACCCAGCATACAGGCAGAGACTGAAACAGACAACCCCCACAACCAGAACAGTGAAAATATGGACTCCGGAGACTGAGGGCATCCTGCAGGACTGTTTTGCTACAACAGACTGGGATATGTTTGAGGCTGCAGCCACTATGGGGGACTCTTCAATCAACATACAGGAGTATGCTGAGCACGTGTCCGGTTACATCAGCACGTGTGTGGACAACATCGTGCCCACCGTACAGGTGAAGAGGTTCCCCAACCAGAAACCTTGGGTCAACAACCAGGTACGACACATGCTGCGTGCTCGTTCTCTTGCATTCAGATCAGGCAATGAGACTGAGTACAAAGCTGCGAAGTACAAACTGAGGAAGACCATCACAGTGGCCAAGAGGCAGTACAGGGAGAAACTGGATGGCTTCTACTCCACTGCTGATCAAGGAGGATGTGGCAAGGCCTGCAGCACATCACAGACTACAGGAGCACCACCAGCACCATCAGCTCCACAGACAGCCTACCGGATGATCTCAACACATTCTACACCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU43689 True 704 TUCP 0.50 2 72241530 72242270

Neighbor


gene id symbol gene type direction distance location
prkaa2 prkaa2,LOC107716554 coding downstream 209890 72013255 ~ 72031640 (-)
LOC103032944 tmed5,LOC108415774,LOC107733818,LOC108258151,LOC105910820,LOC107581519 coding downstream 1051555 71180928 ~ 71189975 (-)
pigc pigc,LOC107581520,LOC107697628,LOC107712841,LOC107597814 coding downstream 1064324 71174229 ~ 71177206 (-)
ccnk ccnk,LOC107560198,LOC107555300,LOC107678663 coding downstream 1135711 71099602 ~ 71105819 (-)
trnat-ugu_81 NA coding downstream 1144827 71096631 ~ 71096703 (-)
bloc1s2 bloc1s2,LOC107697361,LOC107716556,LOC107581516 coding upstream 156521 72398791 ~ 72402415 (-)
pcsk9 pcsk9 coding upstream 256452 72498722 ~ 72518295 (-)
bsnd NA coding upstream 280395 72522665 ~ 72527600 (-)
lexm NA coding upstream 329209 72571479 ~ 72579512 (-)
LOC103032851 NA coding upstream 371168 72613438 ~ 72619980 (-)
G32538 NA non-coding downstream 91246 72149820 ~ 72150284 (-)
G32536 NA non-coding downstream 91743 72149583 ~ 72149787 (-)
G32524 NA non-coding downstream 157246 72081714 ~ 72084284 (-)
G32386 NA non-coding downstream 952295 71260995 ~ 71289235 (-)
G32389 NA non-coding downstream 961125 71279620 ~ 71280405 (-)
G32565 NA non-coding upstream 65126 72307396 ~ 72308300 (-)
G32567 NA non-coding upstream 72071 72314341 ~ 72314797 (-)
G32571 NA non-coding upstream 80394 72322664 ~ 72322979 (-)
G32604 NA non-coding upstream 120660 72362930 ~ 72363341 (-)
G32606 NA non-coding upstream 123260 72365530 ~ 72365737 (-)
G32492 NA other downstream 259477 71970504 ~ 71982053 (-)
G32364 NA other downstream 1099192 71138486 ~ 71142338 (-)
G32343 NA other downstream 1152069 71088875 ~ 71089461 (-)
LOC103033556 LOC108410406 other downstream 1198348 70917981 ~ 71043182 (-)
sec63 sec63,LOC107726621,LOC107696131,LOC107726458 other downstream 3079626 69145308 ~ 69161904 (-)
G32611 NA other upstream 285513 72527783 ~ 72542447 (-)
G32714 NA other upstream 455403 72697673 ~ 72698010 (-)
pla2g7 pla2g7,LOC108440964,LOC107553425,LOC107696191 other upstream 561723 72803993 ~ 72813530 (-)
LOC103026087 NA other upstream 627438 72869708 ~ 72919297 (-)
LOC103029909 LOC108412949 other upstream 679636 72921906 ~ 73033786 (-)

Expression



Co-expression Network