G32579


Basic Information

Item Value
gene id G32579
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72362951 ~ 72363341 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43715
GTCTCCGCAGAAGGTATAGCGACCGACCCTGATAAGGTagaagctgtgaagcagtggccAGTACCTACCACTCTGAAAGCTTTACGCTCATTCTTAGGGTTCTGTAGCTATTACCGAAGATTCGTGCAGGGGTTTTCAAAGATAGCTGGTCCACTGCATGATCTGGTAAATAACTGTCTAATGGTTGGACCTCCCTCTAGAGTAAATGAGCGGTTGTTGAGCTTATGGAGTACTGAGTGTCAGACctcttttgatgttttaaaggaAAAGCTGGTTAGTGCTCCGGTGCTTGGGTTTGCAGACTTCACTTGCCCTTTCACTGTAGAGACAGATGCGAGTAGCCACGGTTTAGGAGCTGTCTTATGTCAGCAACAGGATGGTAAAAGGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43715 True 391 lncRNA 0.43 1 72362951 72363341

Neighbor

gene id symbol gene type direction distance location
LOC111191956 NA coding upstream 154815 72206947 ~ 72208136 (+)
plpp3 plpp3,LOC107712879,LOC107716555,LOC107697342,LOC107657212 coding upstream 278706 72036206 ~ 72084245 (+)
LOC107197929 NA coding upstream 365310 71988157 ~ 71997641 (+)
LOC111191308 LOC108415780 coding upstream 661657 71698448 ~ 71701294 (+)
oma1 LOC107581495 coding upstream 1023651 71316242 ~ 71339300 (+)
dhcr24 dhcr24,LOC107581458,LOC107687183,LOC107566150 coding downstream 196016 72559357 ~ 72567455 (+)
LOC103033168 si:ch211-121a2.4,LOC103033168,LOC108416079,LOC107581514,LOC108257924,LOC107687197,LOC107712847 coding downstream 240872 72604213 ~ 72610182 (+)
sirt5 sirt5,LOC107687181,LOC107712885,LOC107581456 coding downstream 263899 72627240 ~ 72636248 (+)
LOC111191362 LOC108416099,LOC107559745,LOC107712833,LOC108248366 coding downstream 291478 72654819 ~ 72679083 (+)
LOC103023468 vsnl1a,LOC103023468,LOC103379314,LOC107378186,LOC102798040,LOC104929407,LOC107553484 coding downstream 379677 72743018 ~ 72777057 (+)
G32570 NA non-coding upstream 39945 72322661 ~ 72323006 (+)
G32556 NA non-coding upstream 120140 72242485 ~ 72242811 (+)
G32539 NA non-coding upstream 212160 72150568 ~ 72150791 (+)
G32535 NA non-coding upstream 213475 72149275 ~ 72149476 (+)
LOC111191996 NA non-coding upstream 900074 71457906 ~ 71462877 (+)
G32630 NA non-coding downstream 201668 72565009 ~ 72595678 (+)
G32644 NA non-coding downstream 263055 72626396 ~ 72626685 (+)
G32713 NA non-coding downstream 334108 72697449 ~ 72697765 (+)
G32716 NA non-coding downstream 338181 72701522 ~ 72701806 (+)
G32769 NA non-coding downstream 478510 72841851 ~ 72844396 (+)
dab1 dab1,LOC107581465 other upstream 382588 71463100 ~ 71980363 (+)
G32229 NA other upstream 1193395 71167524 ~ 71169556 (+)
G32225 NA other upstream 1221767 71137512 ~ 71141184 (+)
G32198 NA other upstream 1287065 71073848 ~ 71075886 (+)
G32151 brox,LOC107710643,LOC107732498,LOC107568230 other upstream 1495308 70856811 ~ 70867643 (+)
usp24 usp24 other downstream 40193 72403534 ~ 72497064 (+)
G32641 NA other downstream 232565 72595906 ~ 72596937 (+)
sf3b6 SF3B6,sf3b6,pm14 other downstream 418452 72781793 ~ 72786363 (+)
cd2ap cd2ap other downstream 781309 73144650 ~ 73196220 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other downstream 1075715 73439056 ~ 73506987 (+)

Expression


Co-expression Network