G32611


Basic Information

Item Value
gene id G32611
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72527783 ~ 72542447 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43757
AGTGGGGCAGTCCGGGGGAAGGCGGGTCCTGGAGGTTTGAAATCAGATCGCAGCTTCCCCAGCTGGAGCAGAGAGAGGCGTGTGAGCGGAATCCTGTtcctggagagagagacagcttcCCGTTCTGGGGGCCTTTTTTCTCCGCAGCGCGCGCTCAGTCTACAGGAAATGAGCGGTGAGCGGGGAACCGGACAGCGGCtcgcccctctctctttctctctctgtgtgaacTGAGTCCATAAAGCGCCTCCAGCAGTCCTAATCCGGCCCTCACTGCCGCCGCCGCGCGGAGCCGCTGGAGGAGATCaggggcagcagcagcagcaggaggctGGGGTTGATCTGGAGTCTTTCACTGTGATCTCTGGGGACATGAGCTGACACCACTCTGGCCTGGCTTTTGTGCTGTGCTCTGTGCAACACAACTCCCTCTCAACCTCAGAGCCAACCTCCTCTCCTTCATACAGAACACAGagactatacacacacacacacacatatacacactgtgGTGTTGGCAGAGTGGCGGGCATTGAGGCTCCGCGAGATGGCTCCGCTGAGGAATGTAAGATGTCGGTGCTCCAAAAGGGGTTGGTGAGTCTGGGGGTGCTGGTACTGGCAGCTGGAGTATGCATCACCGCGTACGCAGGCATTGTCGGCTTGGCTGTGTGCAGCCTAGGCCTCGTCATTCTGATCTCCTCCTTCTGCAATGTTATGAAGTCCAACAGTCACCTGACCATTCCAGGTCACTTTCTGCTCCACCCACGCACTGGCACCCGCTACACCTATGAGCAGGCTGTCGCTCTGCAGAGGAGGCTGGACAGGATCCGTAGAGCATCAGCAGAAGAGCGGCGCTCCATTCAGCGCTGCCCTACAACACCCAGCCTCCACAGCCTGCCTGATACACCACCTCCTTGGGATATGGAGCCCCCGCCCCCCTATGAGACTGTCATGAAGACCACTACACCCCTCAACCAGCTATGACCGTGTGATGGTGATGCTTACATATGTTACGAGCTGAATGCTAGCAAAGTGGTTAGCTAAACAAGTTGCTTGTAAGTATTTAGCATTTGTATTGTCTGTAAATTACTCAGGCTGAAGGAGAACCACAAGTGACCGCTGACTTTCGCCACGTCTTATATTCCTTCTCATGTCTTCGTCATATATATTTGACTCACTGCTGTTCATATGGCTTTGAAAAACCACTTAAAAGGAAGTTTTTTTATTCCAGCCACTGCAGGAAACTGTGGTATTCTTGTCAGACTGTTTAACATGGAAATCTCTGAAGACGGTAAATGAGTCATTAGTAGGAGTTACCAAGCTGTGGTTTTAAAAAGGGAGTGGGAAATGTCAGAGTGTGCTGATTTCCCTGCTCTAACGGAGCTACTAAACCTGGCAGTTAACAGGTTAATTGAATCAGGTAAACCAAACTGTGCAGGAATCTGGCCCTCCAGAATTGCCCAGCCCTGTTTTAcaggttttattgttttttaggaAGTAGCAACCCTGGCTTAGGGTCAGTAAACTAGATCCACTAAAATTGACTCAGGACAGTTTCTGGCctataaatgagaaatggctgtgtGTTTAGCACATCATTTGTtttctcagttgatcaggttttaCACCAGgcaaaaaatataacatatacatttaatgtattaaacgAATAAGGcagtacacacagtacaggTCTAGCTGTTGAATTGGTTAAGTGCCTTAAGGTTTGTAATGGTGTGCAGTGCAGATAATCTGGCAGactctgagtggagaagaaaagTGAAGTAAAGCTTACGTGTACCATGCCTGGGAGAAACATTTCTAAGTGCAGagtgttgatttaataaatagatCAAATTATGGACCAGGACTGAAATAAGACATTAGTTTGATATTGCGttttggtaaataaaaaaatacattgttttatagtttatttctcattttgagaAAAAATTTGCTTTGACATACTTTGGAGTATTTTGACAAGTTCCTGTTTTCAGCTGGCTCTAATGCTAGTGGGAAATCTAAGAGGGCGTTTACATGCTTTCCAGCAAAGTGATGACAGATAGCAGACAGATAGTCTTATGTTTCCACTGCCACTCCCAATTTCATGTCTTAATCAGTTTGGCCTTGATCTCCGTCCACaaacacaataacaaaaaaCTAGCAACACATGTCATTGCATTAATGTGTTGTATGAACATAACATAAGAAAGGATAAAACTATCTTTAACATTACTCTGGTGATTACACTACAAAATAATAGTTCACCCCAAAATCTATACTCATTATGTTTATTAGCCTTTCCATTGAttgcattataaatgtatatgaaatgaaaaaaagggCATAATTAATCTATGTTATCTAATCTAAGTATAACAGCCTTTCCATGGCAGtaaacacatgcatttacactagTTATTATGAATGTTGGGGAAGAAGAAGGTTGTGTTCATTTCTGCCAGGCCAGGGGTCTGAATTTCTGACCTAACAGTCCCAGTTCTGCTTCTATAAGTTTCACACCACAGCCCTTAActccttatttttttcccataatCATTTTACAAtgattaaaacacttaaaaccaGCCACTGAAATTGGTGTATTAGAagccacaagaaaaaaaaaacacttggacATGGACAAACTGAAagaaatgctaaaataataatcCTAGCTGAAAGCCTCTGCAGTGTTACATCCTGTGTATTCACCCCAATAGTgcctatatttttaaaaagtgaaaataaataatggctATTGCCTTTGGACCTTTACTCAGTTTAATAACTGTTACAGTTTAATATCAGAGAGCACCATGTATGTTATttaagaattttatttttttttataaaaaaaaaagggagtgGGATCTGCACTCATTTTAAACACTCATTTCTCAGGCTTTGTACCTTTCTATGAGCTTTtgtgcaaaatgtgtatttttcaaAACAGTGTGAGCTTCACTTCTTAATGTATACCACTGtttgtgatttattttcttttttttttttcctcagctgTGTTGTGCTAATTTAATGCCACTTCCAAATA

Function

NR:

description
protein PRRC2B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43757 True 3061 TUCP 0.43 4 72527783 72542447

Neighbor

gene id symbol gene type direction distance location
bsnd NA coding downstream 183 72522665 ~ 72527600 (-)
pcsk9 pcsk9 coding downstream 9488 72498722 ~ 72518295 (-)
bloc1s2 bloc1s2,LOC107697361,LOC107716556,LOC107581516 coding downstream 125368 72398791 ~ 72402415 (-)
prkaa2 prkaa2,LOC107716554 coding downstream 496143 72013255 ~ 72031640 (-)
LOC103032944 tmed5,LOC108415774,LOC107733818,LOC108258151,LOC105910820,LOC107581519 coding downstream 1337808 71180928 ~ 71189975 (-)
lexm NA coding upstream 29032 72571479 ~ 72579512 (-)
LOC103032851 NA coding upstream 70991 72613438 ~ 72619980 (-)
LOC103029590 NA coding upstream 305102 72847549 ~ 72865625 (-)
LOC103026697 NA coding upstream 499021 73041468 ~ 73082008 (-)
tnfrsf21 tnfrsf21,LOC103398585 coding upstream 549128 73091575 ~ 73127688 (-)
G32616 NA non-coding downstream 30732 72493608 ~ 72497051 (-)
G32620 usp24,LOC107687191 non-coding downstream 44919 72479262 ~ 72482864 (-)
G32606 NA non-coding downstream 162046 72365530 ~ 72365737 (-)
G32604 NA non-coding downstream 164442 72362930 ~ 72363341 (-)
G32571 NA non-coding downstream 204804 72322664 ~ 72322979 (-)
G32645 dhcr24,LOC107687183,LOC107581458 non-coding upstream 16941 72559388 ~ 72563499 (-)
G32658 NA non-coding upstream 53455 72595902 ~ 72596898 (-)
G32659 NA non-coding upstream 54583 72597030 ~ 72597468 (-)
G32660 NA non-coding upstream 57758 72600205 ~ 72600426 (-)
G32665 NA non-coding upstream 66258 72608705 ~ 72610143 (-)
G32557 NA other downstream 285513 72241530 ~ 72242270 (-)
G32492 NA other downstream 545730 71970504 ~ 71982053 (-)
G32364 NA other downstream 1385445 71138486 ~ 71142338 (-)
G32343 NA other downstream 1438322 71088875 ~ 71089461 (-)
LOC103033556 LOC108410406 other downstream 1484601 70917981 ~ 71043182 (-)
G32714 NA other upstream 155226 72697673 ~ 72698010 (-)
pla2g7 pla2g7,LOC108440964,LOC107553425,LOC107696191 other upstream 261546 72803993 ~ 72813530 (-)
LOC103026087 NA other upstream 327261 72869708 ~ 72919297 (-)
LOC103029909 LOC108412949 other upstream 379459 72921906 ~ 73033786 (-)
G32914 NA other upstream 845415 73387862 ~ 73388612 (-)

Expression


Co-expression Network