G32644


Basic Information

Item Value
gene id G32644
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72626396 ~ 72626685 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43805
ctgcccctcctccctgtgtgtgtgtgtgtgcagcgagacgggaggaggggcagacagttccctgtcatatcagagcgatttcaccgcaaaatgttatttgcgttttgtcagtgttggattggaagagcaaaaatagaaaagtaccgcaatgtaacccttttattttagcagagtaactgtaatctgattaccatttactgaagcagtaactgtaacggattacagttacttataatttgtaatctgattacgtaacgccgttacatgtaatccgttacttcccaacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43805 True 290 lncRNA 0.43 1 72626396 72626685

Neighbor

gene id symbol gene type direction distance location
LOC103033168 si:ch211-121a2.4,LOC103033168,LOC108416079,LOC107581514,LOC108257924,LOC107687197,LOC107712847 coding upstream 16214 72604213 ~ 72610182 (+)
dhcr24 dhcr24,LOC107581458,LOC107687183,LOC107566150 coding upstream 58941 72559357 ~ 72567455 (+)
LOC111191956 NA coding upstream 418260 72206947 ~ 72208136 (+)
plpp3 plpp3,LOC107712879,LOC107716555,LOC107697342,LOC107657212 coding upstream 542151 72036206 ~ 72084245 (+)
LOC107197929 NA coding upstream 628755 71988157 ~ 71997641 (+)
sirt5 sirt5,LOC107687181,LOC107712885,LOC107581456 coding downstream 555 72627240 ~ 72636248 (+)
LOC111191362 LOC108416099,LOC107559745,LOC107712833,LOC108248366 coding downstream 28134 72654819 ~ 72679083 (+)
LOC103023468 vsnl1a,LOC103023468,LOC103379314,LOC107378186,LOC102798040,LOC104929407,LOC107553484 coding downstream 116333 72743018 ~ 72777057 (+)
tdrd6 NA coding downstream 160311 72786996 ~ 72803789 (+)
LOC103024428 LOC103024428,LOC108440977 coding downstream 188957 72815642 ~ 72822277 (+)
G32630 NA non-coding upstream 30718 72565009 ~ 72595678 (+)
G32579 NA non-coding upstream 263055 72362951 ~ 72363341 (+)
G32570 NA non-coding upstream 303390 72322661 ~ 72323006 (+)
G32556 NA non-coding upstream 383585 72242485 ~ 72242811 (+)
G32539 NA non-coding upstream 475605 72150568 ~ 72150791 (+)
G32713 NA non-coding downstream 70764 72697449 ~ 72697765 (+)
G32716 NA non-coding downstream 74837 72701522 ~ 72701806 (+)
G32769 NA non-coding downstream 215166 72841851 ~ 72844396 (+)
LOC111191374 NA non-coding downstream 250359 72877044 ~ 72877730 (+)
G32787 NA non-coding downstream 318129 72944814 ~ 72945464 (+)
G32641 NA other upstream 29459 72595906 ~ 72596937 (+)
usp24 usp24 other upstream 129332 72403534 ~ 72497064 (+)
dab1 dab1,LOC107581465 other upstream 646033 71463100 ~ 71980363 (+)
G32229 NA other upstream 1456840 71167524 ~ 71169556 (+)
G32225 NA other upstream 1485212 71137512 ~ 71141184 (+)
sf3b6 SF3B6,sf3b6,pm14 other downstream 155108 72781793 ~ 72786363 (+)
cd2ap cd2ap other downstream 517965 73144650 ~ 73196220 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other downstream 812371 73439056 ~ 73506987 (+)
selp NA other downstream 1361816 73988501 ~ 74016347 (+)

Expression


Co-expression Network