pla2g7 (pla2g7,LOC108440964,LOC107553425,LOC107696191)


Basic Information

Item Value
gene id pla2g7
gene name pla2g7,LOC108440964,LOC107553425,LOC107696191
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72803993 ~ 72813530 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU43941
GCGGGGCAGGAGTGGAGGAGACTGGGCTGGGACGAGTTTCAGTCTGACTGCGGCTCCGCTCTATGTCCGCTCCTGCTCTCCGGAGACTGGTACGGGCAGCGCCGCTGAGAGGGGTGTCTGACAGGCCGCTGTGTGGCTCAGGTTTAAAGCGTAAGTGGAACAGCCTGCTGTCTGCTGTAATGGGGAATTCAAGCTGTCACAACGCTTTGGGGATCCCAGCCGCGAAAGGGCCACACCAAGTGGGGTGTACGGATTTAATGGTGGGCCACACAGTACAGG
>XM_007245382.3
CGGAACTATGGAGCGGCGGGGCAGGAGTGGAGGAGACTGGGCTGGGACGAGTTTCAGTCTGACTGCGGCTCCGCTCTATGTCCGCTCCTGCTCTCCGGAGACTGGTACGGGCAGCGCCGCTGAGAGGGGTGTCTGACAGGCCGCTGTGTGGCTCAGGTTTAAAGCGTAAGTGGAACAGCCTGCTGTCTGCTGTAATGGGGAATTCAAGCTGTCACAACGCTTTGGGGATCCCAGCCGCGAAAGGGCCACACCAAGTGGGGTGTACGGATTTAATGGTGGGCCACACAGTACAGGGAACGTTCTTCAGATTGTACTATCCGTGCCAAACATCTGAGGGTTTTGAGAAGCCAGACTGGGTTCCGTGCAGAGAATACTTTAATGGCCTTGCAGACTTCATGAAAATTAGCAGATCACTGAGTGAACGAATTTTCAACTATCTCTTTGGGTCTTACAAAATCCCAGCAGCATACAATGCACCTTTTAAACCAGGCGAAAAATACCCAGTAGTAATCTTTTCCCATGGACTTGGAGCTTTCagGACATTGTATTCAGCCATATGTGCAGAGCTGGCCTCACAGGGCTTTGTTGTTGCCGCGGTGGAACACAGAGATGAATCAGCATCTGCAACATTCTACTACAAGGAGCGGAGTGAGGCACAACCAAAACCTCCTGGAAAGCGTGAAAACTTCCGGCCTGTGTCCGACAATCTGGAAGAGCAGTGGATGTACTACAGGCCACTAAAAACAGGAGAGCGGGAATTCCCTCTTAGAAACAAGCAAGTGAAACAAAGAGCAGATGAATGCATCCGAGCGTTGGATCTTCTTTTTGACATCAATGCAGGGAAGTCTGTGGAAAATGTCTTGGAATCAGAGTTTGACTTTACAACACTGGAGAATGGTATGGACCTATGTAGAATAGCAATTATGGGTCATTCTTTTGGTGGAGCCACAGTGATCGAGTGTTTGTGCAAGGAAGTCAGATTCAAGTGTGGTGTTGCATTGGATACGTGGATGTTTCCCCTCGACGAGGAAATGTTTCCAGATGTGAAACAGCCCTTGTTCTTCATAAACTCTGAGAAGTTTCAGTGGGCTGGGAATATTATCCGTATGAAGAAGTTGGACTCCGCATTCATTCCAAGAAAAATGATCACAATCAAGGGGACAGTCCATCAGAGCTTCCCTGATTTCACCTTTCTAACCGGTAACTGGATTGGGAGGATCCTTAAGCTGAAAGGAGAAATTGATCCTCACATAGCAATGGACCTTTGCAACCACGCATCGCTGGCATTCCTTCAACGTCACTTGTCTCTCAACAAAGATTTCAATCAATGGGATCATCTAATTGAGGGGAAAGACGACAACTTGATTCCAGGCACCAATATCACTATACCTCAGTCATCAATGTAATCCAGCAGTAGAAAATGTGCAGTGTGCCTCATTTCATCactttttgcattataaggctacattcacacagcaggtacaagtggcccaaatctgataCTTAGTTTAGGCtgtccacaaatattttaaaCCCATGTCTGACATCTGTCTGAACGGTTTGTGCTTTGTAAGTGGTAGGCATGCAGACAGAGCAATGCTTCatgttaagttttgttttaatcCTTGTCAGAAACTCAAGAGCTATAAATAAGTTCAAGCTGCAGCCTAGATCCTCACCAACAATTCACTTCAGCTCGCAAAAAAGGACACATTGTTCGGCCACGGACAGGTTTTTTTTCGCAATCTGTAGCTCCATTGGGCCAATTGATTAGGAATACTGCATGGCTGTGATAAGAAGCCTTTCAATATTGTTAAAAGAGACGCATCTAAAAAGATTTATGAAGTCTGTTATGTCATTGTTCCTGCcactcaaattcaaattcactCAATTCTATAACCCACTCCCCAATCAACTTACAGCCACATTCTGTTCTCCTGGTGgtcttttattcatttagtttGATGTAAAAGTAACATGAATTTCAAACTAGCTGTTCATACAGTCTCGTTGCAGCGAATCGTAAATGTCACTGATTTCAAAACCACAAATAGAAGTGGCCCAAACTGTAATTGAATGTCagatttaattctttttttttttttttttggctatttACACAGCCACCCAAAGGACACCTGGGTAACATGACGTATAGGATTGGATTTTGGCCACATTTATCTGATGTGTGATTGTAGCctaaataaagctaaagatACACAACCATGAAATACAGCATGAAATACAGGTGTTTTTACCATGCTATATTGGAAATTTCTGTCATTTATGTAGAAGACTAATTCTGGCTGCTGTGTTGGATTGAATTTCTAGGATCGGACAATGCAGGTCATATTATAACTAATTTAAATTGAGATGGGAATTGTTTATATAGCATTATTGTCTGTATCCCTCAATCAGTCTATTTTAATCATTAGTCAATATATTACCGTCCCAAGTGCCTTGTTTTTACAGGTTATATTTTGCAGTACTACATTTTTATATTGAGAATCAGGTTTTTTTCCAatcattgaaatacaaaaaaaaaatgtgacattAAAGTTTATTGCTAAATGAGGGGAAAACAATTTGGAGGCCTCCTGTGCACTAACAATTACCTCAGTACCACCCACTTGAtcagttttgtttctttttagacAATAAGCATGTACAATTGTTGGAAATAAACTTAAGGTATGTGTCAGATTTATTTGCTAGGTGATGCATTATGAACTCATTATGCATTCCTTATGCAATATGATAATTTTTAATGATCTGTAAAACTGTCAGTGAAATTGAGTATACACTACAATCTGccttacttttctttctttcaggaTGAATGGTTTAGGCTGTATATTAATGTATGTTGGTtgcaataaaaatgacaaacactttttactttttttttttcatactcaAA
>XM_007245383.3
GGAACTATGGAGCGGCGGGGCAGGAGTGGAGGAGACTGGGCTGGGACGAGTTTCAGTCTGACTGCGGCTCCGCTCTATGTCCGCTCCTGCTCTCCGGAGACTGGTACGGGCAGCGCCGCTGAGAGGGGTGTCTGACAGGCCGCTGTGTGGCTCAGACAGGTTTAAAGCGTAAGTGGAACAGCCTGCTGTCTGCTGTAATGGGGAATTCAAGCTGTCACAACGCTTTGGGGATCCCAGCCGCGAAAGGGCCACACCAAGTGGGGTGTACGGATTTAATGGTGGGCCACACAGTACAGGGAACGTTCTTCAGATTGTACTATCCGTGCCAAACATCTGAGGGTTTTGAGAAGCCAGACTGGGTTCCGTGCAGAGAATACTTTAATGGCCTTGCAGACTTCATGAAAATTAGCAGATCACTGAGTGAACGAATTTTCAACTATCTCTTTGGGTCTTACAAAATCCCAGCAGCATACAATGCACCTTTTAAACCAGGCGAAAAATACCCAGTAGTAATCTTTTCCCATGGACTTGGAGCTTTCagGACATTGTATTCAGCCATATGTGCAGAGCTGGCCTCACAGGGCTTTGTTGTTGCCGCGGTGGAACACAGAGATGAATCAGCATCTGCAACATTCTACTACAAGGAGCGGAGTGAGGCACAACCAAAACCTCCTGGAAAGCGTGAAAACTTCCGGCCTGTGTCCGACAATCTGGAAGAGCAGTGGATGTACTACAGGCCACTAAAAACAGGAGAGCGGGAATTCCCTCTTAGAAACAAGCAAGTGAAACAAAGAGCAGATGAATGCATCCGAGCGTTGGATCTTCTTTTTGACATCAATGCAGGGAAGTCTGTGGAAAATGTCTTGGAATCAGAGTTTGACTTTACAACACTGGAGAATGGTATGGACCTATGTAGAATAGCAATTATGGGTCATTCTTTTGGTGGAGCCACAGTGATCGAGTGTTTGTGCAAGGAAGTCAGATTCAAGTGTGGTGTTGCATTGGATACGTGGATGTTTCCCCTCGACGAGGAAATGTTTCCAGATGTGAAACAGCCCTTGTTCTTCATAAACTCTGAGAAGTTTCAGTGGGCTGGGAATATTATCCGTATGAAGAAGTTGGACTCCGCATTCATTCCAAGAAAAATGATCACAATCAAGGGGACAGTCCATCAGAGCTTCCCTGATTTCACCTTTCTAACCGGTAACTGGATTGGGAGGATCCTTAAGCTGAAAGGAGAAATTGATCCTCACATAGCAATGGACCTTTGCAACCACGCATCGCTGGCATTCCTTCAACGTCACTTGTCTCTCAACAAAGATTTCAATCAATGGGATCATCTAATTGAGGGGAAAGACGACAACTTGATTCCAGGCACCAATATCACTATACCTCAGTCATCAATGTAATCCAGCAGTAGAAAATGTGCAGTGTGCCTCATTTCATCactttttgcattataaggctacattcacacagcaggtacaagtggcccaaatctgataCTTAGTTTAGGCtgtccacaaatattttaaaCCCATGTCTGACATCTGTCTGAACGGTTTGTGCTTTGTAAGTGGTAGGCATGCAGACAGAGCAATGCTTCatgttaagttttgttttaatcCTTGTCAGAAACTCAAGAGCTATAAATAAGTTCAAGCTGCAGCCTAGATCCTCACCAACAATTCACTTCAGCTCGCAAAAAAGGACACATTGTTCGGCCACGGACAGGTTTTTTTTCGCAATCTGTAGCTCCATTGGGCCAATTGATTAGGAATACTGCATGGCTGTGATAAGAAGCCTTTCAATATTGTTAAAAGAGACGCATCTAAAAAGATTTATGAAGTCTGTTATGTCATTGTTCCTGCcactcaaattcaaattcactCAATTCTATAACCCACTCCCCAATCAACTTACAGCCACATTCTGTTCTCCTGGTGgtcttttattcatttagtttGATGTAAAAGTAACATGAATTTCAAACTAGCTGTTCATACAGTCTCGTTGCAGCGAATCGTAAATGTCACTGATTTCAAAACCACAAATAGAAGTGGCCCAAACTGTAATTGAATGTCagatttaattctttttttttttttttttggctatttACACAGCCACCCAAAGGACACCTGGGTAACATGACGTATAGGATTGGATTTTGGCCACATTTATCTGATGTGTGATTGTAGCctaaataaagctaaagatACACAACCATGAAATACAGCATGAAATACAGGTGTTTTTACCATGCTATATTGGAAATTTCTGTCATTTATGTAGAAGACTAATTCTGGCTGCTGTGTTGGATTGAATTTCTAGGATCGGACAATGCAGGTCATATTATAACTAATTTAAATTGAGATGGGAATTGTTTATATAGCATTATTGTCTGTATCCCTCAATCAGTCTATTTTAATCATTAGTCAATATATTACCGTCCCAAGTGCCTTGTTTTTACAGGTTATATTTTGCAGTACTACATTTTTATATTGAGAATCAGGTTTTTTTCCAatcattgaaatacaaaaaaaaaatgtgacattAAAGTTTATTGCTAAATGAGGGGAAAACAATTTGGAGGCCTCCTGTGCACTAACAATTACCTCAGTACCACCCACTTGAtcagttttgtttctttttagacAATAAGCATGTACAATTGTTGGAAATAAACTTAAGGTATGTGTCAGATTTATTTGCTAGGTGATGCATTATGAACTCATTATGCATTCCTTATGCAATATGATAATTTTTAATGATCTGTAAAACTGTCAGTGAAATTGAGTATACACTACAATCTGccttacttttctttctttcaggaTGAATGGTTTAGGCTGTATATTAATGTATGTTGGTtgcaataaaaatgacaaacactttttactttttttttttcatactcaAA
>XM_015604834.2
CGATAGAGACGAGCACCTCAGATAACTAGTTACGATAGCTTAGCTGATTAAGTTCAGTTTTATCACCAGTTTTTAGCTTTGCTGGATGTATTTCCTCTCTGACAACAGGTTTAAAGCGTAAGTGGAACAGCCTGCTGTCTGCTGTAATGGGGAATTCAAGCTGTCACAACGCTTTGGGGATCCCAGCCGCGAAAGGGCCACACCAAGTGGGGTGTACGGATTTAATGGTGGGCCACACAGTACAGGGAACGTTCTTCAGATTGTACTATCCGTGCCAAACATCTGAGGGTTTTGAGAAGCCAGACTGGGTTCCGTGCAGAGAATACTTTAATGGCCTTGCAGACTTCATGAAAATTAGCAGATCACTGAGTGAACGAATTTTCAACTATCTCTTTGGGTCTTACAAAATCCCAGCAGCATACAATGCACCTTTTAAACCAGGCGAAAAATACCCAGTAGTAATCTTTTCCCATGGACTTGGAGCTTTCagGACATTGTATTCAGCCATATGTGCAGAGCTGGCCTCACAGGGCTTTGTTGTTGCCGCGGTGGAACACAGAGATGAATCAGCATCTGCAACATTCTACTACAAGGAGCGGAGTGAGGCACAACCAAAACCTCCTGGAAAGCGTGAAAACTTCCGGCCTGTGTCCGACAATCTGGAAGAGCAGTGGATGTACTACAGGCCACTAAAAACAGGAGAGCGGGAATTCCCTCTTAGAAACAAGCAAGTGAAACAAAGAGCAGATGAATGCATCCGAGCGTTGGATCTTCTTTTTGACATCAATGCAGGGAAGTCTGTGGAAAATGTCTTGGAATCAGAGTTTGACTTTACAACACTGGAGAATGGTATGGACCTATGTAGAATAGCAATTATGGGTCATTCTTTTGGTGGAGCCACAGTGATCGAGTGTTTGTGCAAGGAAGTCAGATTCAAGTGTGGTGTTGCATTGGATACGTGGATGTTTCCCCTCGACGAGGAAATGTTTCCAGATGTGAAACAGCCCTTGTTCTTCATAAACTCTGAGAAGTTTCAGTGGGCTGGGAATATTATCCGTATGAAGAAGTTGGACTCCGCATTCATTCCAAGAAAAATGATCACAATCAAGGGGACAGTCCATCAGAGCTTCCCTGATTTCACCTTTCTAACCGGTAACTGGATTGGGAGGATCCTTAAGCTGAAAGGAGAAATTGATCCTCACATAGCAATGGACCTTTGCAACCACGCATCGCTGGCATTCCTTCAACGTCACTTGTCTCTCAACAAAGATTTCAATCAATGGGATCATCTAATTGAGGGGAAAGACGACAACTTGATTCCAGGCACCAATATCACTATACCTCAGTCATCAATGTAATCCAGCAGTAGAAAATGTGCAGTGTGCCTCATTTCATCactttttgcattataaggctacattcacacagcaggtacaagtggcccaaatctgataCTTAGTTTAGGCtgtccacaaatattttaaaCCCATGTCTGACATCTGTCTGAACGGTTTGTGCTTTGTAAGTGGTAGGCATGCAGACAGAGCAATGCTTCatgttaagttttgttttaatcCTTGTCAGAAACTCAAGAGCTATAAATAAGTTCAAGCTGCAGCCTAGATCCTCACCAACAATTCACTTCAGCTCGCAAAAAAGGACACATTGTTCGGCCACGGACAGGTTTTTTTTCGCAATCTGTAGCTCCATTGGGCCAATTGATTAGGAATACTGCATGGCTGTGATAAGAAGCCTTTCAATATTGTTAAAAGAGACGCATCTAAAAAGATTTATGAAGTCTGTTATGTCATTGTTCCTGCcactcaaattcaaattcactCAATTCTATAACCCACTCCCCAATCAACTTACAGCCACATTCTGTTCTCCTGGTGgtcttttattcatttagtttGATGTAAAAGTAACATGAATTTCAAACTAGCTGTTCATACAGTCTCGTTGCAGCGAATCGTAAATGTCACTGATTTCAAAACCACAAATAGAAGTGGCCCAAACTGTAATTGAATGTCagatttaattctttttttttttttttttggctatttACACAGCCACCCAAAGGACACCTGGGTAACATGACGTATAGGATTGGATTTTGGCCACATTTATCTGATGTGTGATTGTAGCctaaataaagctaaagatACACAACCATGAAATACAGCATGAAATACAGGTGTTTTTACCATGCTATATTGGAAATTTCTGTCATTTATGTAGAAGACTAATTCTGGCTGCTGTGTTGGATTGAATTTCTAGGATCGGACAATGCAGGTCATATTATAACTAATTTAAATTGAGATGGGAATTGTTTATATAGCATTATTGTCTGTATCCCTCAATCAGTCTATTTTAATCATTAGTCAATATATTACCGTCCCAAGTGCCTTGTTTTTACAGGTTATATTTTGCAGTACTACATTTTTATATTGAGAATCAGGTTTTTTTCCAatcattgaaatacaaaaaaaaaatgtgacattAAAGTTTATTGCTAAATGAGGGGAAAACAATTTGGAGGCCTCCTGTGCACTAACAATTACCTCAGTACCACCCACTTGAtcagttttgtttctttttagacAATAAGCATGTACAATTGTTGGAAATAAACTTAAGGTATGTGTCAGATTTATTTGCTAGGTGATGCATTATGAACTCATTATGCATTCCTTATGCAATATGATAATTTTTAATGATCTGTAAAACTGTCAGTGAAATTGAGTATACACTACAATCTGccttacttttctttctttcaggaTGAATGGTTTAGGCTGTATATTAATGTATGTTGGTtgcaataaaaatgacaaacactttttactttttttttttcatactcaAA

Function

symbol description
pla2g7 Predicted to enable 1-alkyl-2-acetylglycerophosphocholine esterase activity. Predicted to act upstream of or within lipid catabolic process. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); glomerulonephritis (multiple); hemolytic-uremic syndrome; proteinuria (multiple); and type 2 diabetes mellitus. Orthologous to several human genes including PLA2G7 (phospholipase A2 group VII).

NR:

description
platelet-activating factor acetylhydrolase-like

GO:

id name namespace
GO:0016042 lipid catabolic process biological_process
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity molecular_function

KEGG:

id description
K01062 PLA2G7, PAFAH; platelet-activating factor acetylhydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
TU43941 False 279 lncRNA 0.60 2 72812048 72813515
XM_007245382.3 False 2920 mRNA 0.41 11 72803993 72813530
XM_007245383.3 True 2923 mRNA 0.41 11 72803993 72813529
XM_015604834.2 False 2872 mRNA 0.40 11 72803993 72813245

Neighbor

gene id symbol gene type direction distance location
LOC103032851 NA coding downstream 184013 72613438 ~ 72619980 (-)
lexm NA coding downstream 224481 72571479 ~ 72579512 (-)
bsnd NA coding downstream 276393 72522665 ~ 72527600 (-)
pcsk9 pcsk9 coding downstream 285698 72498722 ~ 72518295 (-)
bloc1s2 bloc1s2,LOC107697361,LOC107716556,LOC107581516 coding downstream 401578 72398791 ~ 72402415 (-)
LOC103029590 NA coding upstream 34019 72847549 ~ 72865625 (-)
LOC103026697 NA coding upstream 227938 73041468 ~ 73082008 (-)
tnfrsf21 tnfrsf21,LOC103398585 coding upstream 278045 73091575 ~ 73127688 (-)
ptchd4 ptchd4,LOC107553442,LOC107732383,LOC107732542,LOC107690039,LOC107601530 coding upstream 458030 73271560 ~ 73302026 (-)
spats1 spats1 coding upstream 615638 73429168 ~ 73436214 (-)
G32758 NA non-coding downstream 897 72801624 ~ 72803096 (-)
G32746 sf3b6,SF3B6 non-coding downstream 17633 72781826 ~ 72786360 (-)
G32737 visl1,LOC106589078,LOC106571602 non-coding downstream 29607 72753708 ~ 72774386 (-)
G32683 NA non-coding downstream 151214 72652355 ~ 72652779 (-)
G32668 NA non-coding downstream 177415 72626326 ~ 72626578 (-)
G32816 NA non-coding upstream 28319 72841849 ~ 72842490 (-)
G32828 NA non-coding upstream 63530 72877060 ~ 72877774 (-)
G32824 NA non-coding upstream 130039 72943569 ~ 72945672 (-)
G32870 NA non-coding upstream 364870 73178400 ~ 73196144 (-)
G32879 NA non-coding upstream 404370 73217900 ~ 73218151 (-)
G32714 NA other downstream 105983 72697673 ~ 72698010 (-)
G32611 NA other downstream 261546 72527783 ~ 72542447 (-)
G32557 NA other downstream 561723 72241530 ~ 72242270 (-)
G32492 NA other downstream 821940 71970504 ~ 71982053 (-)
G32364 NA other downstream 1661655 71138486 ~ 71142338 (-)
LOC103026087 NA other upstream 56178 72869708 ~ 72919297 (-)
LOC103029909 LOC108412949 other upstream 108376 72921906 ~ 73033786 (-)
G32914 NA other upstream 574332 73387862 ~ 73388612 (-)
G32946 NA other upstream 738885 73552415 ~ 73552883 (-)
ak9 ak9 other upstream 943378 73756908 ~ 73778866 (-)

Expression


Co-expression Network