G32937


Basic Information

Item Value
gene id G32937
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73533661 ~ 73536104 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44203
tgtgtaacgCTGTGTTGAAGgacgggacgaggagagcggacgctaatgcaagtaatatttattgaaaaacagaaaacaaaacataaaccaaacagaaactcaGACACATGGAGACCAACTAACAGACGGGattaacacagccgtgacagacgtgaaaacgcacaagaaccgacaaaaacactactgacagagacgcttaaatacacacacaaggcgggaaagagaacaggtaacacctggggactgactaacgaggggcggagctacacatggacacaggtgagtggaaaaacaccagggaagaaacacagagaagccGGGACACGTGAGAATAACAGACatgagaaaagacagaaaacaggcaaaagatgtGACAG
>TU44204
tgtgtaacgCTGTGTTGAAGgacgggacgaggagagcggacgctaatgcaagtaatatttattgaaaaacagaaaacaaaacataaaccaaacagaaactcaGACACATGGAGACCAACTAACAGACGGGattaacacagccgtgacagacgtgaaaacgcacaagaaccgacaaaaacactactgacagagacgcttaaatacacacacaaggcgggaaagagaacaggtaacacctggggactgactaacgaggggcggagctacacatggacacaggtgagtggaaaaacaccagggaagaaacacagagaagccGGGACACGTGAGAATAACAGACatgagaaaagacagaaaacaggcaaaagatgtGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44203 True 377 lncRNA 0.56 2 73533661 73536104
TU44204 False 377 lncRNA 0.46 2 73533661 73536104

Neighbor

gene id symbol gene type direction distance location
spats1 spats1 coding downstream 97447 73429168 ~ 73436214 (-)
ptchd4 ptchd4,LOC107553442,LOC107732383,LOC107732542,LOC107690039,LOC107601530 coding downstream 231635 73271560 ~ 73302026 (-)
tnfrsf21 tnfrsf21,LOC103398585 coding downstream 405973 73091575 ~ 73127688 (-)
LOC103026697 NA coding downstream 451653 73041468 ~ 73082008 (-)
LOC103029590 NA coding downstream 668036 72847549 ~ 72865625 (-)
LOC103031805 LOC103031805,LOC105892805 coding upstream 68223 73604327 ~ 73609208 (-)
LOC103032852 lbr coding upstream 94147 73630251 ~ 73639424 (-)
enah enah coding upstream 111065 73647169 ~ 73747910 (-)
ppil6 ppil6 coding upstream 213882 73749986 ~ 73755516 (-)
LOC103034242 pla2g4a,LOC108442417,LOC108257972,LOC106560559 coding upstream 247903 73784007 ~ 73813141 (-)
LOC111191385 NA non-coding downstream 205507 73326367 ~ 73328154 (-)
G32900 NA non-coding downstream 208294 73319644 ~ 73325367 (-)
G32891 NA non-coding downstream 270108 73262330 ~ 73263553 (-)
G32879 NA non-coding downstream 315510 73217900 ~ 73218151 (-)
G32870 NA non-coding downstream 337517 73178400 ~ 73196144 (-)
G33076 LOC108442415,LOC108257608,LOC106560557,LOC107726497,LOC107696164 non-coding upstream 346789 73882893 ~ 73884914 (-)
G33091 NA non-coding upstream 414808 73950912 ~ 73953542 (-)
G33099 NA non-coding upstream 455638 73991742 ~ 73992572 (-)
G32914 NA other downstream 145049 73387862 ~ 73388612 (-)
LOC103029909 LOC108412949 other downstream 499875 72921906 ~ 73033786 (-)
LOC103026087 NA other downstream 614364 72869708 ~ 72919297 (-)
pla2g7 pla2g7,LOC108440964,LOC107553425,LOC107696191 other downstream 720131 72803993 ~ 72813530 (-)
G32714 NA other downstream 835651 72697673 ~ 72698010 (-)
G32946 NA other upstream 16311 73552415 ~ 73552883 (-)
ak9 ak9 other upstream 220804 73756908 ~ 73778866 (-)
LOC111191425 NA other upstream 260359 73796463 ~ 73868538 (-)

Expression


Co-expression Network