G33043


Basic Information

Item Value
gene id G33043
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73935146 ~ 73935885 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44334
CCTGACTGGTAATCCTGAGGGTTGCCCTCATCAAGAACATCTTTAGCCTCTGGTTTAGGTTTAGTGGgcttttctgcttcttttgaGGGAGAAGGATCTTGTTTCACAGAATCAGGAGTAATGGACAAATCGTGTGTTGTTGGGGGACCCCGTGTACTTTCTTTAGTCTTTGGTGTTTCTGTAGTGATGGGAATCTCTGTTGGGTCCAGGTCCTTGGGCTCCACTCCTGCAGAGGCTGCACTTGTAGTGGGCTCTGGCTGTGCTGGCTGTTCTGTCTGTGGTCCAGGGTTGTCCTCTGGAGCCACTGTTCCTTCAGGTTGGTCGGGGTTAGATGGTTTAAGCTCAGGTGAGTTTGTCTGGGTGTTCTGGTCAGGCAGCGCAGTAGTGGTAGCCAGCTGAGCTGCCTGTGCTGTATTTGTGGGGGTTGGTGGCAGGTCTGAATGGTCGCTGTTTGGCATGGTGGTTACCTCAGGAGATGGAGTAGAAGTTGGGGAGTTGGAAGGAAGTGGCTCAGATTCAGATGTATCTTGAGAACTTTCAGGGTCTTTCTCAGGTACAGGAGGATCATTGTTACCTGCAGGGAAAGCACAGTTACAGGTATGAAGTAATTCTTAGAAGTGTTTCTTGGGGTGGCACGCCATAATTTAGCCTGATTTAGCTCATGAGTGTTGCGGCAGGTAGTATCAGAAACTACCCTTCAT

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU44334 True 701 lncRNA 0.56 2 73935146 73935885

Neighbor

gene id symbol gene type direction distance location
LOC103035930 tpr coding upstream 3778 73907862 ~ 73931368 (+)
pdc pdcb,pdc,LOC108442415,LOC106560557,LOC108257608,LOC107553454 coding upstream 50718 73879666 ~ 73884428 (+)
LOC103034574 ptgs2b,LOC108442416,LOC107732418,LOC107698381,LOC107553505,LOC107726413,LOC107696154,LOC107599092 coding upstream 114323 73814970 ~ 73820823 (+)
opn5 opn5 coding upstream 687961 73219526 ~ 73247185 (+)
LOC103025777 mep1a coding upstream 1087332 72833413 ~ 72847814 (+)
scyl3 scyl3,LOC104956565 coding downstream 10193 73946078 ~ 73954704 (+)
sell NA coding downstream 63698 73999583 ~ 74004379 (+)
LOC103039489 NA coding downstream 161294 74097179 ~ 74126080 (+)
G33041 NA non-coding upstream 1341 73933159 ~ 73933805 (+)
G32961 NA non-coding upstream 298454 73634296 ~ 73636692 (+)
G32960 NA non-coding upstream 301517 73630287 ~ 73633629 (+)
G32959 NA non-coding upstream 314279 73620566 ~ 73620867 (+)
G32951 NA non-coding upstream 342835 73592077 ~ 73592311 (+)
G33051 NA non-coding downstream 19999 73955884 ~ 73960904 (+)
G33054 cunh1orf112,c25h1orf112 non-coding downstream 31334 73967219 ~ 73970910 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other upstream 428159 73439056 ~ 73506987 (+)
cd2ap cd2ap other upstream 738926 73144650 ~ 73196220 (+)
sf3b6 SF3B6,sf3b6,pm14 other upstream 1148783 72781793 ~ 72786363 (+)
G32641 NA other upstream 1338209 72595906 ~ 72596937 (+)
usp24 usp24 other upstream 1438082 72403534 ~ 72497064 (+)
selp NA other downstream 52616 73988501 ~ 74016347 (+)

Expression


Co-expression Network