G33054 (cunh1orf112,c25h1orf112)


Basic Information

Item Value
gene id G33054
gene name cunh1orf112,c25h1orf112
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73967219 ~ 73970910 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44347
CAGTGTGCCGCAGGTGCTCCTCTACCATGGACTGATACTTCATGCTCTGTTTTATAATGAACTTCCATGTGTTGGCATGCAGTGCCATGTCCAAGGAGGATATGACTGAGCATATGTCCAGCAGACTGTGgatcaCTGCCACTATATCAGATATTCCCTCTCTGGAGGCACTGTTCTCTAGGCTAAtcttatccagcagctccatcAGGCTTTTCTGTAGTGAATAGGCTTCTTTAAACAGACCCTGCAGCAGATCTCCCACAAGTGACAGCCTTCCACTGTACATTAACTCACTCTcCTTGCAATGCTGAAAGGTGTCCTTCAGGAGCTGGAGAACACAGGAGGGCAGAGTACGAATGGAGTTCAGGGAGACAGCTTCCTCAAAAGAGCACACATGACGCACACATCCTGACAGAGCTTCCAGGGTCTGAACCATCATCTGCAATATGTTCCTGAGGAATGCTTGCAACTCTGTGTTTTGGCTAGACAGGCCTCCAATTTGCTTGGAGATCTCTTCCAAAAACCCAGTGAATATTACCACCACTTTAGGTAGGACTTTGGAGAAACACTCTTCCTCCAGTTCTGCCAGATGTAAATGAGGGAGGAACATGTCTACAATAATTCTCAAGACATTGATGTGTTCCTCCCAGCTATTAGTGTTGTGATGCATGGCGACTAGTTTGGGCAGCACCACTTTGACTTCTTGTCTGCATGTCTCTGGACTCCACTGAACAACCTCCTCCAAAAGTGTAGTTTGAGACATTGCACAAGCTTCACCGCTGTCCGACCATACTGATCAAACATACAACTCAATAGACCACGGGTCTGGGGTCAGTTGATGGAAATACGAGAGTAGTTTTAGTGTAAAATTAACTTGAGTCTTTCTCGTGTTTTGAATTTGCCTCCTCTTCCTCAACACTGCTTCACAGGGACGAGTCCATTCAGTCTGAGGGGTTCACACTGCATTTCTTGTTAAAATAGTCAAAACGCTCATTAAATGTGTCACAGAACAGTTCCTAATTTAACActacagtacatttttaatatgac

Function

NR:

description
PREDICTED: uncharacterized protein C1orf112 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44347 True 1050 lncRNA 0.45 9 73967219 73970910

Neighbor

gene id symbol gene type direction distance location
scyl3 scyl3,LOC104956565 coding upstream 12515 73946078 ~ 73954704 (+)
LOC103035930 tpr coding upstream 35851 73907862 ~ 73931368 (+)
pdc pdcb,pdc,LOC108442415,LOC106560557,LOC108257608,LOC107553454 coding upstream 82791 73879666 ~ 73884428 (+)
LOC103034574 ptgs2b,LOC108442416,LOC107732418,LOC107698381,LOC107553505,LOC107726413,LOC107696154,LOC107599092 coding upstream 146396 73814970 ~ 73820823 (+)
opn5 opn5 coding upstream 720034 73219526 ~ 73247185 (+)
sell NA coding downstream 28673 73999583 ~ 74004379 (+)
LOC103039489 NA coding downstream 126269 74097179 ~ 74126080 (+)
G33051 NA non-coding upstream 6315 73955884 ~ 73960904 (+)
G33043 NA non-coding upstream 31334 73935146 ~ 73935885 (+)
G33041 NA non-coding upstream 33414 73933159 ~ 73933805 (+)
G32961 NA non-coding upstream 330527 73634296 ~ 73636692 (+)
G32960 NA non-coding upstream 333590 73630287 ~ 73633629 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other upstream 460232 73439056 ~ 73506987 (+)
cd2ap cd2ap other upstream 770999 73144650 ~ 73196220 (+)
sf3b6 SF3B6,sf3b6,pm14 other upstream 1180856 72781793 ~ 72786363 (+)
G32641 NA other upstream 1370282 72595906 ~ 72596937 (+)
usp24 usp24 other upstream 1470155 72403534 ~ 72497064 (+)
selp NA other downstream 17591 73988501 ~ 74016347 (+)

Expression


Co-expression Network