selp


Basic Information

Item Value
gene id selp
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73988501 ~ 74016347 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44367
AGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAATGACTCAAAACCCATCTGTGAAGCTGTCCTTTGTCCAGCTCTTGAGGACCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAAGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGGTAAGAAGAGGATATTTA
>XM_022678556.1
ATAAGACAGAAAAAATGTCCGGAAACCTTTGTGACCTTTGACGGCATGAAAAACATGGGAGAAGGAGGGGTGCAAGCTTCCTGACTTGCTGCTTGCTTCCTCTTTATAGTccagaaagggaaaaaaacgaaagtgtgaaagagagaaagtgccAGAGGAGGGTATTTCCAGCGGAGGAATTCCAGACCTCTTAGTGGATCTTATCACCTCTGATTCCGGGAAGAATGGACGCTGTCCAGTCTGTGGACCACCTCTTTAAATACAGCATCACAACAGCTTTAAACTCAGAACCATTCAATCCTCTGAAAAAGACACATCACCTGCACTGTGATATTGAACACGACTAAAAAGATCACTTACAATGGACTTGCAGAGAACAATCAGCTTCAAAACTATACATTTTTCACTTTTCCTTCTGATTTCAATGCTTCTTTATTGGACCACAGTACAAGGCTGGTCCTACAACTACTCCAACACAAAAATGAACTGGGATGAAGCCCGTACATTTTGTAAGAAAAACTACACAGATATGGTAGCAATCCAGAACCACGGAGAAATCAACCACCTCAACAGCATCCTCCCCCGAGTGAGTGGATACTACTGGATCGGCATCCGCAAGATCAACAACAGCTGGACCTGGGTGGGCACCAACAAGAAGCTGACAGCTGAGGCTGAGAACTGGGCAAAGCATGAGCCCAATAATGGGCGAAACAATGAGGACTGTGTGGAGATCTACATTAAGCGAGAAAAGGATGAAGGAAAATGGAACGATGAGtcctgcaaaaaaaagaagactgcCCTTTGCTACACTGCATCCTGCGAGAAAGACTCCTGCAGCTACCATGGCGAGTGTGTGGAGACCATCAACAGCCACAAGTGTGAATGTTTTGAAGGTTTCTATGGAGAAAAGTGTGAAAATGTTGTCAAATGCCAAGCAGAGGACATATTTAATCCTGAGAATGGCAGTGTCCACTGTGTCCACCCAAACGGAGGGTTCTCCTATAATTCTCAGTGTGAGTACACCTGTAATGAAGGTTACCAGGCAGTCGGCTCACAAACAACACGGTGCGAAAGCTTGGCAACTTGGTCAACTAAACCACCAACTTGTGAACCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAATGACTCAAAACCCATCTGTGAAGCTGTCCTTTGTCCAGCTCTTGAGGACCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAAGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAATGACTCAAAACCCATCTGTGAAGctaTCCTTTGCCCAGGTCTTGAGGACCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAGGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAAGAGATGCCGTACTGTGAAGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGTCACTGGACAGTGGAACGACTCAAAACCCATCTGTGAAGCTGTCCTTTGTCCAGCTCTTGAGGACCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAAGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCATGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAACGACTCAAAACCCATCTGTGAAGCTATCCTTTGCCCAGGTCTCGAGGATCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAGGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATAATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAACGACTCAAAACCCATCTGTGAAGCTATCCTTTGCCCAGGTCTCGAGGATCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAGGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATAATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAACGACTCAAAACCCATCTGTGAAGCTTCTCCAGCTCACTCTTTCTTGAGTGACCCTGTAGTAACTGGCCTGACCGTAGCAGGAGGTGCTACTGCTTTCTCCAGCCTTGCTCTGGCTGCCTGGATACTGAAGAAACTCAAGCAGAAAGCTGAAAAGTTTGATTTAAGtGACTCAGACATTGATGTGTCGCCCCAAactgTAGGTATGATGTTTCTCAGGGTGATGTGTCTGCAGATGCAGCTTCTGCTGTACCTCAGACTGACATCTGTGGCTGTCACAAGCTGGAGCTACTCCGTCTCTAACCAGAACATGAGCTGGTCCAACTCCAGCACCTGGTGTACTAAGAACTACACAGGTCTGATGGTCATTCAGAACAGGGAGCAGCATGACTATCTTAAGCGTGAACtgttacaaacaaataaatactggATTGGCCTCAGAAAGAACTCTAGTGTCTGGATGTGGTATGGAACGTCAAGGAAAATGGAGAGTCAAGAATTATGGGATCCAAATGAACCCAATAACATAAAGGAAAATGAGGACTGTGTGGAAATGTCCATAAGGCGTAATGAACCTGAGCGTAACGGCAAGTTTAATGACGAAACGTGTAGTAAAACAAAACTTGCCCTGTGCTATACAGAACACTGCAGGTCAAACCCGTGCGTCAATGGAGCAAAGTGCCAGGAGACGATCAACGGCTACAACTGCACTTGCATCCAGATGTCTGTTGTTGGTGGGAAAGTGAACTGCTCTACAGACAAAAGCCCGTTGTGTACAGTGGAGTGCCTCCCTGGTCACCTGCTTCTGGGCCCTCAGGAATACAGCTGTCGACCTGGTGGCTCATGGAGCCTCTTTAGACCACTGTGTGCAAGTTATGGCCATTTGTTACTGGCTTCAACTATGTGCAGCGTCCTTTCCACAGATTCTTACTCCAGCTATGCTCTTAAGATGTTTGTTATGAAGCATATCAGTCTGGGTTTTGGATGGCTGAGTCTTACTATCATGGTTTATAATGCCCAGGCCTGGACGTACCATTACCAAACAGAGAACAACATGGACTGGTTGACAGCTCGCCAGTGGTGCCAAAGACATTTTACAGATATGGTGGCAATCCAGAACCAGGGGGAGATTGCCTACCTGGACCAGATTCTGCCAATTCATCGCACATACTACTGGATTGGCATCAGGAAGGTGGAGGGGGAGTGGATGTGGGTGGGGACCAGAAAGCCCCTGACTGATGAGGCAGCCAACTGGGCAACCGGAGAGCCCAATAATCAGGGCAGTGGTGAAGATTGTGTGGAAATGTACATCAAGAGGCTAAAGGACACAGCAAAGTGGAATGATGAGAGGTGCAACAAGAGGAAAGCAGCGCTTTGTTACAAAGCGTCCTGTTTTGAGACGTCCTGCAGTGAACATGCTGAGTGTGTGGAAATCATTGGGAACTACAAATGCCAGTGTCACCAAGGCTTCACCGGACCTCGCTGTGAACAAGTTGTACAGTGTCCTCCACTTATGAAGGCGGTCATTGGTTGGAATATGAACTGCAGCAATCCTATCAACTCAAACAGCTACAGCTCCACCTGCACGTTCAGCTGTGAGGAGGGCTTTGAGCTTGTAGGCTCACCCACAACCCAGTGTGATCATACTGGACACTGGACACAACCAGCCCCGACCTGTACAGCTGTAACTTGTGGCCCCCCTATGGTCCCTGCCAATGGCAATATGACCTGCACTGGTCCTCTTGCAAAGTTCTCCTTTCGTTCATCCTGTGCTTTGATCTGTGAGGAAGGATATTCACCAGCAGGAGAGAGCACCCTGACCTGTCTCAAGACAGGCAACTGGTCTGCAGAAACACCCACATGTGAAGTTGTGTCTTGTGGTTCCCTGATGATCCCAAATGGTAATGTAACCTGCAGTGACCCGCTGGGAAAGTTCTCGTTTCGCTCGTCCTGCACTGTGACCTGTGAGAAGGGATTTACACTGAGAGGAGAGAGCACACTGACCTGCCTGGAGACCAGCAACTGGTCTACAGAAACACCCACATGTGCAGCTCGACagtgtcctctgctgttcagtccagagaatggatggatgaactgTTCTGATCCTCACTGGTCCTTCAGTTACGGCTCACTCTGCAGTTTCGGGTGTGAGGACGGTCATGTACTCACAGGAGAACCTTCGCTAGACTGCACTGTGACTGGATCCTGGAGTCAAGAGACTCCTTTCTGTGATGCTGTTCAGTGCGAGCCCCTCTCATATTTACCACTCGTCCACTTGGATGCTACTCTGGTTCCTTCTATGAACTGTTTACACCCAAGGGGAAACTTTAGCTTTGGCTCTCAGTGTATGTTCCAGTGTTCAGAAGGCTACAGGCTGAATGGAACCAGTGAGCTGATCTGTACCTCCACTGGGATTTGGACAGCAAAGCTGCCCACCTGCATTGcCGAGGAGATGTCGTTAGGGACTGGCCTGCTTCTCTACACTGCTATTGGTGCTGGATCATCAGTTGGTGTTCTGCTGGCTGCAGGGCTGgttgtgctggtggtacagatgttgaagaagaaaaaggGGCATTACACACCAGATAACTCAGCTTGGGAGGGGGATCTGAATCCCCCCTTTGAGGTGAAGTAGTGAATGAAGTGCCTCTACCTGGACAGTACATTTGGTGCTTTCTCTCCCTGACATTTCCAGATTTGTAGTATTTCTTGAGATCATTAAGAGCATTATGGGGTTGTCTTTATATATctgttatataaataaagtgtgtAATACTGTAa

Function

GO: NA

KEGG:

id description
K06496 SELP, CD62P; selectin, platelet

RNA

RNA id representative length rna type GC content exon number start site end site
TU44367 False 392 TUCP 0.39 3 73990505 73992259
XM_022678556.1 True 5922 mRNA 0.49 35 73988501 74016347

Neighbor

gene id symbol gene type direction distance location
scyl3 scyl3,LOC104956565 coding upstream 33797 73946078 ~ 73954704 (+)
LOC103035930 tpr coding upstream 57133 73907862 ~ 73931368 (+)
pdc pdcb,pdc,LOC108442415,LOC106560557,LOC108257608,LOC107553454 coding upstream 104073 73879666 ~ 73884428 (+)
LOC103034574 ptgs2b,LOC108442416,LOC107732418,LOC107698381,LOC107553505,LOC107726413,LOC107696154,LOC107599092 coding upstream 167678 73814970 ~ 73820823 (+)
opn5 opn5 coding upstream 741316 73219526 ~ 73247185 (+)
LOC103039489 NA coding downstream 80832 74097179 ~ 74126080 (+)
G33054 cunh1orf112,c25h1orf112 non-coding upstream 17591 73967219 ~ 73970910 (+)
G33051 NA non-coding upstream 27597 73955884 ~ 73960904 (+)
G33043 NA non-coding upstream 52616 73935146 ~ 73935885 (+)
G33041 NA non-coding upstream 54696 73933159 ~ 73933805 (+)
G32961 NA non-coding upstream 351809 73634296 ~ 73636692 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other upstream 481514 73439056 ~ 73506987 (+)
cd2ap cd2ap other upstream 792281 73144650 ~ 73196220 (+)
sf3b6 SF3B6,sf3b6,pm14 other upstream 1202138 72781793 ~ 72786363 (+)
G32641 NA other upstream 1391564 72595906 ~ 72596937 (+)
usp24 usp24 other upstream 1491437 72403534 ~ 72497064 (+)

Expression


Co-expression Network